Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 5
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 33.41 | 49.18 |
| GSMUA_Achr10P... | Banana | nucleus | 31.4 | 47.0 |
| GSMUA_Achr8P19810_001 | Banana | nucleus | 33.63 | 43.14 |
| GSMUA_Achr9P05460_001 | Banana | nucleus | 30.07 | 37.09 |
| GSMUA_Achr5P09430_001 | Banana | nucleus | 26.73 | 35.29 |
| CDY01962 | Canola | nucleus | 22.27 | 34.36 |
| AT4G01250.1 | Thale cress | nucleus | 22.72 | 34.23 |
| VIT_15s0046g02190.t01 | Wine grape | nucleus | 26.28 | 33.91 |
| Solyc10g011910.2.1 | Tomato | nucleus | 23.39 | 33.76 |
| GSMUA_Achr7P14300_001 | Banana | nucleus | 22.94 | 33.12 |
| CDY48511 | Canola | nucleus | 21.6 | 32.55 |
| CDY07185 | Canola | nucleus | 21.16 | 32.53 |
| Bra037368.1-P | Field mustard | nucleus | 21.38 | 32.21 |
| GSMUA_Achr6P31840_001 | Banana | nucleus | 27.62 | 32.21 |
| PGSC0003DMT400000215 | Potato | nucleus | 24.72 | 31.53 |
| KRH40377 | Soybean | nucleus | 24.28 | 31.32 |
| Solyc01g095100.2.1 | Tomato | nucleus | 24.72 | 31.27 |
| KRH00856 | Soybean | nucleus | 24.28 | 31.05 |
| GSMUA_Achr1P05010_001 | Banana | nucleus | 24.94 | 30.35 |
| KRH06582 | Soybean | nucleus | 22.49 | 30.15 |
| GSMUA_Achr7P24840_001 | Banana | nucleus | 14.25 | 25.81 |
| GSMUA_Achr5P03670_001 | Banana | nucleus | 19.38 | 25.66 |
| GSMUA_Achr3P15690_001 | Banana | nucleus | 14.25 | 25.2 |
| GSMUA_Achr4P27420_001 | Banana | nucleus | 20.49 | 25.07 |
| GSMUA_Achr4P08360_001 | Banana | nucleus | 14.03 | 24.42 |
| GSMUA_Achr11P... | Banana | nucleus | 20.04 | 24.26 |
| GSMUA_Achr9P03020_001 | Banana | nucleus | 21.6 | 23.6 |
| GSMUA_Achr8P27790_001 | Banana | nucleus | 12.69 | 23.55 |
| GSMUA_Achr8P14610_001 | Banana | nucleus | 20.04 | 23.38 |
| GSMUA_Achr11P... | Banana | nucleus | 20.27 | 23.21 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 12.92 | 22.75 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 13.59 | 22.1 |
| GSMUA_Achr10P... | Banana | nucleus | 13.14 | 22.1 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 12.47 | 21.79 |
| GSMUA_Achr4P15540_001 | Banana | nucleus | 13.81 | 21.68 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 13.36 | 21.35 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 13.14 | 20.92 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 13.81 | 20.81 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 12.92 | 20.57 |
| GSMUA_Achr2P09710_001 | Banana | nucleus | 20.94 | 20.17 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 12.25 | 20.0 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 13.14 | 19.47 |
| GSMUA_Achr8P20660_001 | Banana | nucleus | 10.69 | 18.97 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 11.14 | 18.94 |
| GSMUA_Achr5P20810_001 | Banana | nucleus | 11.36 | 18.41 |
| GSMUA_Achr9P10740_001 | Banana | nucleus | 10.47 | 18.36 |
| GSMUA_Achr4P03660_001 | Banana | nucleus | 10.69 | 17.78 |
| GSMUA_Achr3P29310_001 | Banana | nucleus | 10.91 | 17.69 |
| GSMUA_Achr2P17580_001 | Banana | nucleus | 11.36 | 17.0 |
| GSMUA_Achr10P... | Banana | nucleus | 11.14 | 16.56 |
| GSMUA_Achr9P21560_001 | Banana | nucleus | 11.36 | 13.97 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr10G14710_001 | EnsemblPlants:GSMUA_Achr10P14710_001 | EnsemblPlants:GSMUA_Achr10T14710_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0RI97 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF35 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002968218 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G14710_001]
Coordinates
chr10:-:22895463..22896997
Molecular Weight (calculated)
48284.5 Da
IEP (calculated)
7.537
GRAVY (calculated)
-0.585
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MLATTVSLSE NRFRQFHGIN PNSTLLCSVP PNKSQRASHP LSLFRAAVAL PPSLFGQRRR LYAAPGRVIY RRVCSRAVLK ARFPVLGGGD GRRQLGSERR
101: CAELPAVRDS GGGGDDDDDV GHFLVVASAL EAAPGGGGRQ RWRLCAFTGR KPEADQHLGG GRAIQLLVPQ RLATSFHHNH LPAGRRGRVT STPTVPESRP
201: ASLPNPPVQA KSQQKKVVCH VPADGLSSDT WAWRKYGQKP IKGSPYPRGY YKCSSSKACL ARKQVERSRT DPGIYIITYT GEHNHPMPTH RSALAGSTRH
301: KFPSPPCAAA APGDGGERPS TADPEASPLS ATTAAGLSPA TPLTASMDDE PFRSRPEKGE DGVDEEEEVE DEDDEGLLLV EDMEMMGEDD LLFVRSEESG
401: PASATTAEMG ALFDGDAGFE DHLLPLPWLS NCNSNSNSSS SSSCHGCYR
101: CAELPAVRDS GGGGDDDDDV GHFLVVASAL EAAPGGGGRQ RWRLCAFTGR KPEADQHLGG GRAIQLLVPQ RLATSFHHNH LPAGRRGRVT STPTVPESRP
201: ASLPNPPVQA KSQQKKVVCH VPADGLSSDT WAWRKYGQKP IKGSPYPRGY YKCSSSKACL ARKQVERSRT DPGIYIITYT GEHNHPMPTH RSALAGSTRH
301: KFPSPPCAAA APGDGGERPS TADPEASPLS ATTAAGLSPA TPLTASMDDE PFRSRPEKGE DGVDEEEEVE DEDDEGLLLV EDMEMMGEDD LLFVRSEESG
401: PASATTAEMG ALFDGDAGFE DHLLPLPWLS NCNSNSNSSS SSSCHGCYR
001: MSSEDWDLFA VVRSCSSSVS TTNSCAGHED DIGNCKQQQD PPPPPLFQAS SSCNELQDSC KPFLPVTTTT TTTWSPPPLL PPPKASSPSP NILLKQEQVL
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG
Arabidopsis Description
WRKY27Probable WRKY transcription factor 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.