Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P29310_001 | Banana | nucleus | 63.56 | 83.75 |
| GSMUA_Achr4P03660_001 | Banana | nucleus | 56.16 | 75.93 |
| GSMUA_Achr9P10740_001 | Banana | nucleus | 46.03 | 65.62 |
| GSMUA_Achr8P20660_001 | Banana | nucleus | 44.38 | 64.03 |
| GSMUA_Achr10P... | Banana | nucleus | 46.03 | 55.63 |
| CDY29658 | Canola | nucleus | 44.93 | 50.93 |
| Bra021652.1-P | Field mustard | nucleus | 44.66 | 50.78 |
| CDX97806 | Canola | nucleus | 44.93 | 49.7 |
| CDX84824 | Canola | nucleus | 45.75 | 49.41 |
| Bra022808.1-P | Field mustard | nucleus | 45.48 | 49.11 |
| Bra018303.1-P | Field mustard | nucleus | 44.66 | 48.66 |
| CDY23988 | Canola | nucleus | 45.21 | 48.53 |
| CDY10749 | Canola | nucleus | 44.38 | 48.5 |
| CDY47130 | Canola | nucleus | 44.93 | 47.81 |
| AT2G30590.1 | Thale cress | nucleus | 46.3 | 44.47 |
| GSMUA_Achr2P17580_001 | Banana | nucleus | 35.62 | 43.33 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 31.78 | 41.13 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 31.23 | 40.57 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 28.22 | 40.39 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 30.96 | 40.07 |
| GSMUA_Achr10P... | Banana | nucleus | 28.77 | 39.33 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 27.67 | 39.3 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 28.22 | 39.02 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 29.32 | 38.77 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 30.68 | 36.96 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 27.12 | 36.0 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 29.32 | 35.91 |
| GSMUA_Achr5P20810_001 | Banana | nucleus | 22.47 | 29.6 |
| GSMUA_Achr3P15690_001 | Banana | nucleus | 14.52 | 20.87 |
| GSMUA_Achr7P24840_001 | Banana | nucleus | 13.97 | 20.56 |
| GSMUA_Achr7P14300_001 | Banana | nucleus | 16.99 | 19.94 |
| GSMUA_Achr8P27790_001 | Banana | nucleus | 13.15 | 19.83 |
| GSMUA_Achr4P08360_001 | Banana | nucleus | 13.97 | 19.77 |
| GSMUA_Achr10P... | Banana | nucleus | 16.16 | 19.67 |
| GSMUA_Achr5P09430_001 | Banana | nucleus | 16.99 | 18.24 |
| GSMUA_Achr11P... | Banana | nucleus | 19.45 | 18.11 |
| GSMUA_Achr10P... | Banana | nucleus | 15.07 | 18.03 |
| GSMUA_Achr5P03670_001 | Banana | nucleus | 16.71 | 17.99 |
| GSMUA_Achr4P15540_001 | Banana | nucleus | 13.7 | 17.48 |
| GSMUA_Achr11P... | Banana | nucleus | 17.26 | 16.98 |
| GSMUA_Achr8P14610_001 | Banana | nucleus | 17.81 | 16.88 |
| GSMUA_Achr8P19810_001 | Banana | nucleus | 16.16 | 16.86 |
| GSMUA_Achr9P05460_001 | Banana | nucleus | 16.16 | 16.21 |
| GSMUA_Achr6P31840_001 | Banana | nucleus | 16.99 | 16.1 |
| GSMUA_Achr4P27420_001 | Banana | nucleus | 16.16 | 16.08 |
| GSMUA_Achr1P05010_001 | Banana | nucleus | 15.62 | 15.45 |
| GSMUA_Achr9P03020_001 | Banana | nucleus | 16.44 | 14.6 |
| GSMUA_Achr2P09710_001 | Banana | nucleus | 16.71 | 13.09 |
| GSMUA_Achr10P... | Banana | plastid | 13.97 | 11.36 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr9G21560_001 | EnsemblPlants:GSMUA_Achr9P21560_001 | EnsemblPlants:GSMUA_Achr9T21560_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0U2B5 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF12 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000296A380 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom |
| SEG:seg | : | : | : | : | : |
Description
Putative Protein WRKY1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G21560_001]
Coordinates
chr9:+:26690750..26693139
Molecular Weight (calculated)
40289.3 Da
IEP (calculated)
9.940
GRAVY (calculated)
-0.492
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVEEANSA AVVSCHRVLN LLSETEDQTL AFKVLKAETG NAISMFNKVV SMLSNGVGHA RLRRLTNPQQ LHFNHTIFLD SPAVSRAEPF PLLVQFLPRN
101: LLEKPVNELG STAKIPPQIP PRMLLENPAA ATDAASRGTV QAAYSPNPTH LHFLQQQHNS QVFQIQQHMK FQNEMYGSSN SGKNLMFDNS SCTATASSSR
201: SFLSSLSIDG SMGSMDGKAF NLFGGPQLSD SMNWHLNDRR RCSRGGNDGS GKCAKTSRCH CSKKRKLRVK RTIKVPAISN KLGDIPADDY SWRKYGQKPI
301: KGSPYPRGYY KCSSMKGCPA KKHVERCVED PTMLIVTYEG EHNHAKLLTQ SAHILMSVKE PLATS
101: LLEKPVNELG STAKIPPQIP PRMLLENPAA ATDAASRGTV QAAYSPNPTH LHFLQQQHNS QVFQIQQHMK FQNEMYGSSN SGKNLMFDNS SCTATASSSR
201: SFLSSLSIDG SMGSMDGKAF NLFGGPQLSD SMNWHLNDRR RCSRGGNDGS GKCAKTSRCH CSKKRKLRVK RTIKVPAISN KLGDIPADDY SWRKYGQKPI
301: KGSPYPRGYY KCSSMKGCPA KKHVERCVED PTMLIVTYEG EHNHAKLLTQ SAHILMSVKE PLATS
001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
Arabidopsis Description
WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.