Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P03660_001 | Banana | nucleus | 71.12 | 72.96 |
| GSMUA_Achr9P10740_001 | Banana | nucleus | 59.57 | 64.45 |
| GSMUA_Achr9P21560_001 | Banana | nucleus | 83.75 | 63.56 |
| GSMUA_Achr8P20660_001 | Banana | nucleus | 57.4 | 62.85 |
| GSMUA_Achr10P... | Banana | nucleus | 59.57 | 54.64 |
| Bra021652.1-P | Field mustard | nucleus | 55.23 | 47.66 |
| CDX97806 | Canola | nucleus | 56.68 | 47.58 |
| CDY29658 | Canola | nucleus | 55.23 | 47.52 |
| CDY10749 | Canola | nucleus | 56.68 | 47.01 |
| Bra018303.1-P | Field mustard | nucleus | 56.68 | 46.87 |
| CDX84824 | Canola | nucleus | 56.32 | 46.15 |
| Bra022808.1-P | Field mustard | nucleus | 56.32 | 46.15 |
| CDY47130 | Canola | nucleus | 57.04 | 46.06 |
| CDY23988 | Canola | nucleus | 55.6 | 45.29 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 42.96 | 42.2 |
| GSMUA_Achr2P17580_001 | Banana | nucleus | 45.49 | 42.0 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 42.6 | 41.84 |
| AT2G30590.1 | Thale cress | nucleus | 57.04 | 41.58 |
| GSMUA_Achr10P... | Banana | nucleus | 38.99 | 40.45 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 38.27 | 40.15 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 36.82 | 40.0 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 40.43 | 39.86 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 38.99 | 39.13 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 36.1 | 38.91 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 40.43 | 36.96 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 38.63 | 35.91 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 34.3 | 34.55 |
| GSMUA_Achr5P20810_001 | Banana | nucleus | 30.32 | 30.32 |
| GSMUA_Achr7P24840_001 | Banana | nucleus | 18.05 | 20.16 |
| GSMUA_Achr3P15690_001 | Banana | nucleus | 18.41 | 20.08 |
| GSMUA_Achr4P08360_001 | Banana | nucleus | 18.05 | 19.38 |
| GSMUA_Achr10P... | Banana | nucleus | 20.94 | 19.33 |
| GSMUA_Achr7P14300_001 | Banana | nucleus | 21.66 | 19.29 |
| GSMUA_Achr8P27790_001 | Banana | nucleus | 16.25 | 18.59 |
| GSMUA_Achr10P... | Banana | nucleus | 20.22 | 18.36 |
| GSMUA_Achr5P09430_001 | Banana | nucleus | 22.02 | 17.94 |
| GSMUA_Achr4P15540_001 | Banana | nucleus | 18.41 | 17.83 |
| GSMUA_Achr5P03670_001 | Banana | nucleus | 21.66 | 17.7 |
| GSMUA_Achr11P... | Banana | nucleus | 24.19 | 17.09 |
| GSMUA_Achr8P19810_001 | Banana | nucleus | 21.3 | 16.86 |
| GSMUA_Achr8P14610_001 | Banana | nucleus | 22.74 | 16.36 |
| GSMUA_Achr4P27420_001 | Banana | nucleus | 21.3 | 16.08 |
| GSMUA_Achr9P05460_001 | Banana | nucleus | 20.94 | 15.93 |
| GSMUA_Achr11P... | Banana | nucleus | 20.94 | 15.63 |
| GSMUA_Achr6P31840_001 | Banana | nucleus | 20.94 | 15.06 |
| GSMUA_Achr1P05010_001 | Banana | nucleus | 19.86 | 14.91 |
| GSMUA_Achr9P03020_001 | Banana | nucleus | 21.66 | 14.6 |
| GSMUA_Achr2P09710_001 | Banana | nucleus | 21.3 | 12.66 |
| GSMUA_Achr10P... | Banana | plastid | 17.69 | 10.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr3G29310_001 | EnsemblPlants:GSMUA_Achr3P29310_001 | EnsemblPlants:GSMUA_Achr3T29310_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0SIU7 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF12 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0002965F63 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom |
| SEG:seg | : | : | : | : | : |
Description
Putative Probable WRKY transcription factor 74 [Source:GMGC_GENE;Acc:GSMUA_Achr3G29310_001]
Coordinates
chr3:-:28510625..28512351
Molecular Weight (calculated)
30214.4 Da
IEP (calculated)
10.137
GRAVY (calculated)
-0.477
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVEDANMA AVESCHRVLS LLSETQHQPL AHKSLLAETG TAVSKFTKVV SMLGNGVGHA RLRRLKSPHQ LRFNHSIFLD NPAASRADPS AVLLQLLPRN
101: LLQKPVNESN GGLNLMFDTS SCTATASSSR SFLSSLSIDG SMGSMDGKAF NLFGGPQLSN PMNWHPHDRR CSGGGIDGSG GKCGKTSRCH CSKKRKLRVK
201: RTIKVPAISN KLADIPADDC SWRKYGQKPI KGSPYPRGYY KCSSMRGCPA RKHVERCIED PTMLIVTYEG EHNHAKL
101: LLQKPVNESN GGLNLMFDTS SCTATASSSR SFLSSLSIDG SMGSMDGKAF NLFGGPQLSN PMNWHPHDRR CSGGGIDGSG GKCGKTSRCH CSKKRKLRVK
201: RTIKVPAISN KLADIPADDC SWRKYGQKPI KGSPYPRGYY KCSSMRGCPA RKHVERCIED PTMLIVTYEG EHNHAKL
001: MEEVEAANRS AIESCHGVLN LLSQRTSDPK SLTVETGEVV SKFKRVASLL TRGLGHGKFR STNKFRSSFP QHIFLESPIC CGNDLSGDYT QVLAPEPLQM
101: VPASAVYNEM EPKHQLGHPS LMLSHKMCVD KSFLELKPPP FRAPYQLIHN HQQIAYSRSN SGVNLKFDGS GSSCYTPSVS NGSRSFVSSL SMDASVTDYD
201: RNSFHLTGLS RGSDQQHTRK MCSGSLKCGS RSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCIDETSMLI VTYEGEHNHS RILSSQSAHT
101: VPASAVYNEM EPKHQLGHPS LMLSHKMCVD KSFLELKPPP FRAPYQLIHN HQQIAYSRSN SGVNLKFDGS GSSCYTPSVS NGSRSFVSSL SMDASVTDYD
201: RNSFHLTGLS RGSDQQHTRK MCSGSLKCGS RSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCIDETSMLI VTYEGEHNHS RILSSQSAHT
Arabidopsis Description
WRKY39Probable WRKY transcription factor 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.