Factsheet for GSMUA_Achr11P06260_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P14610_001	Banana	nucleus	50.94	49.09
GSMUA_Achr5P03670_001	Banana	nucleus	43.67	47.79
GSMUA_Achr4P27420_001	Banana	nucleus	47.17	47.68
GSMUA_Achr9P03020_001	Banana	nucleus	43.4	39.17
Bra026228.1-P	Field mustard	nucleus	39.08	36.62
GSMUA_Achr11P...	Banana	nucleus	38.27	36.22
GSMUA_Achr2P09710_001	Banana	nucleus	45.28	36.05
AT1G30650.1	Thale cress	nucleus	41.78	36.05
CDX77581	Canola	nucleus	36.39	35.71
CDX98217	Canola	nucleus	36.66	35.32
GSMUA_Achr10P...	Banana	nucleus	25.34	31.33
GSMUA_Achr7P24840_001	Banana	nucleus	20.22	30.24
GSMUA_Achr7P14300_001	Banana	nucleus	25.07	29.9
GSMUA_Achr10P...	Banana	nucleus	24.26	29.51
GSMUA_Achr4P08360_001	Banana	nucleus	20.49	29.46
GSMUA_Achr8P27790_001	Banana	nucleus	19.14	29.34
GSMUA_Achr5P09430_001	Banana	nucleus	25.34	27.65
GSMUA_Achr8P19810_001	Banana	nucleus	25.88	27.43
GSMUA_Achr3P15690_001	Banana	nucleus	18.6	27.17
GSMUA_Achr9P05460_001	Banana	nucleus	25.88	26.37
GSMUA_Achr4P15540_001	Banana	nucleus	19.68	25.52
GSMUA_Achr1P05010_001	Banana	nucleus	24.53	24.66
GSMUA_Achr6P31840_001	Banana	nucleus	24.53	23.64
GSMUA_Achr9P22950_001	Banana	nucleus	17.79	23.49
GSMUA_Achr8P20660_001	Banana	nucleus	15.63	22.92
GSMUA_Achr5P21910_001	Banana	nucleus	15.09	21.96
GSMUA_Achr9P10740_001	Banana	nucleus	15.09	21.88
GSMUA_Achr10P...	Banana	nucleus	15.63	21.72
GSMUA_Achr3P27880_001	Banana	nucleus	15.9	21.45
GSMUA_Achr3P05670_001	Banana	nucleus	15.63	21.01
GSMUA_Achr3P29310_001	Banana	nucleus	15.63	20.94
GSMUA_Achr4P20600_001	Banana	nucleus	15.9	20.92
GSMUA_Achr4P03660_001	Banana	nucleus	15.09	20.74
GSMUA_Achr6P03810_001	Banana	nucleus	14.29	20.62
GSMUA_Achr7P15930_001	Banana	nucleus	15.36	20.21
GSMUA_Achr3P00510_001	Banana	nucleus	14.29	20.08
GSMUA_Achr10P...	Banana	plastid	24.26	20.04
GSMUA_Achr5P04870_001	Banana	nucleus	15.36	19.13
GSMUA_Achr1P23560_001	Banana	nucleus	15.36	18.81
GSMUA_Achr5P20810_001	Banana	nucleus	13.75	18.41
GSMUA_Achr10P...	Banana	nucleus	14.56	17.88
GSMUA_Achr9P21560_001	Banana	nucleus	16.98	17.26
GSMUA_Achr2P17580_001	Banana	nucleus	13.21	16.33

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr11G06260_001	EnsemblPlants:GSMUA_Achr11P06260_001	EnsemblPlants:GSMUA_Achr11T06260_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0RPV6	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000295EDD8	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr11G06260_001]

Coordinates

chr11:+:4870372..4872787

Molecular Weight (calculated)

39933.6 Da

IEP (calculated)

6.010

GRAVY (calculated)

-0.622

Length

371 amino acids

Sequence
(BLAST)

001: MCDYFWQRRE NGQGDLADVV RSGGSGSASG SEFPVVSDWH PPSEPTVPPS SSTAATESTG GGGGGGIMSQ QLLMSEEMIT KPRDIIPRAF QLSSGGAKPS
101: PLSPIEASSG AVGCSADDGG VQISSTRSLG VKRRKNQAKK VVCIPAPAAA TNRSSGEVVP SDLWAWRKYG QKPIKGSPYP RGYYRCSSSK GCSARKQVER
201: SRTNPNMLVI TYTSEHNHPW PTQRNALAGS TRSQASKNSS SASKTSFGRS LVSPTAPKAD PKVKEEEEAA EIDNEPMIPE SNHPDDFFAD LAELETDPMS
301: PIFSKVLIHA KQPEEEEEEP EDKGLDDALL DNIRHSSVPQ LSIPVCTYVM KALLSKSLSI QIDVEREPFR A

Best Arabidopsis Sequence Match ( AT2G34830.2 )
(BLAST)

001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.