Factsheet for GSMUA_Achr9P03020_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P03670_001	Banana	nucleus	44.77	54.28
GSMUA_Achr4P27420_001	Banana	nucleus	45.26	50.68
VIT_10s0003g05740.t01	Wine grape	nucleus, plastid	37.47	49.36
CDY69417	Canola	nucleus	27.25	48.48
GSMUA_Achr8P14610_001	Banana	nucleus	40.88	43.64
GSMUA_Achr11P...	Banana	nucleus	39.17	43.4
GSMUA_Achr2P09710_001	Banana	nucleus	47.93	42.27
Solyc02g021680.2.1	Tomato	nucleus	37.23	40.16
PGSC0003DMT400039061	Potato	nucleus	37.23	37.05
Bra041029.1-P	Field mustard	nucleus	36.5	36.85
CDY09551	Canola	nucleus	36.5	36.32
GSMUA_Achr11P...	Banana	nucleus	34.06	35.71
Bra005388.1-P	Field mustard	nucleus	34.79	35.48
KRH42254	Soybean	nucleus	36.25	34.73
CDY43651	Canola	nucleus	35.04	34.62
CDY52525	Canola	nucleus	34.79	34.29
Bra021934.1-P	Field mustard	nucleus	32.6	33.84
KRH58373	Soybean	nucleus	35.04	33.49
AT2G34830.2	Thale cress	nucleus	35.28	33.26
GSMUA_Achr10P...	Banana	nucleus	24.09	33.0
GSMUA_Achr10P...	Banana	nucleus	23.11	31.15
GSMUA_Achr7P24840_001	Banana	nucleus	18.49	30.65
GSMUA_Achr4P08360_001	Banana	nucleus	18.73	29.84
GSMUA_Achr7P14300_001	Banana	nucleus	22.38	29.58
GSMUA_Achr8P19810_001	Banana	nucleus	24.33	28.57
GSMUA_Achr5P09430_001	Banana	nucleus	23.6	28.53
GSMUA_Achr8P27790_001	Banana	nucleus	16.79	28.51
GSMUA_Achr9P05460_001	Banana	nucleus	24.33	27.47
GSMUA_Achr3P15690_001	Banana	nucleus	16.79	27.17
GSMUA_Achr1P05010_001	Banana	nucleus	24.33	27.1
GSMUA_Achr6P31840_001	Banana	nucleus	24.57	26.23
GSMUA_Achr4P15540_001	Banana	nucleus	17.76	25.52
GSMUA_Achr9P22950_001	Banana	nucleus	17.03	24.91
GSMUA_Achr5P21910_001	Banana	nucleus	15.09	24.31
GSMUA_Achr10P...	Banana	nucleus	15.57	23.97
GSMUA_Achr7P15930_001	Banana	nucleus	16.3	23.76
GSMUA_Achr6P03810_001	Banana	nucleus	14.84	23.74
GSMUA_Achr3P05670_001	Banana	nucleus	15.82	23.55
GSMUA_Achr8P20660_001	Banana	nucleus	13.87	22.53
GSMUA_Achr9P10740_001	Banana	nucleus	13.63	21.88
GSMUA_Achr3P29310_001	Banana	nucleus	14.6	21.66
GSMUA_Achr10P...	Banana	plastid	23.6	21.6
GSMUA_Achr4P20600_001	Banana	nucleus	14.6	21.28
GSMUA_Achr3P00510_001	Banana	nucleus	13.63	21.21
GSMUA_Achr5P04870_001	Banana	nucleus	15.33	21.14
GSMUA_Achr4P03660_001	Banana	nucleus	13.87	21.11
GSMUA_Achr3P27880_001	Banana	nucleus	14.11	21.09
GSMUA_Achr1P23560_001	Banana	nucleus	14.6	19.8
GSMUA_Achr10P...	Banana	nucleus	14.36	19.54
GSMUA_Achr5P20810_001	Banana	nucleus	12.65	18.77
GSMUA_Achr2P17580_001	Banana	nucleus	12.41	17.0
GSMUA_Achr9P21560_001	Banana	nucleus	14.6	16.44

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr9G03020_001	EnsemblPlants:GSMUA_Achr9P03020_001	EnsemblPlants:GSMUA_Achr9T03020_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0TX11	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002959A91	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr9G03020_001]

Coordinates

chr9:-:2142752..2145100

Molecular Weight (calculated)

45414.3 Da

IEP (calculated)

5.369

GRAVY (calculated)

-0.641

Length

411 amino acids

Sequence
(BLAST)

001: MYDYLWKRME NDHGDLGDIV RAGGRIGPQN MEIEPAVERE LPTEAVAFHT RTESPTDGFG HPLVDLRDSL LGRNTGTEFL DGAEAMLAPS KMAMESSSDP
101: GGGGRFILAR KVLSGKQEVE ISCSIFSSKP SLSSPGEMLQ LSGGSTAGPM DHGDDVQIWS PRSSQEIKRR KSQAKKVVCV PAPVAASSRP SSEAVPSDLW
201: AWRKYGQKPI KGSPYPSIRL LNSERGKDLV FILSITIVIN IYIRGYYRCS SSKGCSARKQ VERSRTDPNI LVITYTSEHN HPWPTQRNAL AGTARSHPSK
301: NGPKCSSDQG VLKSRTAPKE DPMERLVKHE VAEMEKAIEP AAEDDEFHQS HTRMLPEEDQ PDDFFEDLSE LETDPLSLIF SSEGFMESKP DEERANKALD
401: PFSTFDWAGS S

Best Arabidopsis Sequence Match ( AT1G30650.1 )
(BLAST)

001: MCSVSELLDM ENFQGDLTDV VRGIGGHVLS PETPPSNIWP LPLSHPTPSP SDLNINPFGD PFVSMDDPLL QELNSITNSG YFSTVGDNNN NIHNNNGFLV
101: PKVFEEDHIK SQCSIFPRIR ISHSNIIHDS SPCNSPAMSA HVVAAAAAAS PRGIINVDTN SPRNCLLVDG TTFSSQIQIS SPRNLGLKRR KSQAKKVVCI
201: PAPAAMNSRS SGEVVPSDLW AWRKYGQKPI KGSPFPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPIQR NALAGSTRSS TSSSSNPNPS
301: KPSTANVNSS SIGSQNTIYL PSSTTPPPTL SSSAIKDERG DDMELENVDD DDDNQIAPYR PELHDHQHQP DDFFADLEEL EGDSLSMLLS HGCGGDGKDK
401: TTASDGISNF FGWSGDNNYN NYDDQDSRSL

Arabidopsis Description

WRKY14Probable WRKY transcription factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.