Factsheet for PGSC0003DMT400039061

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g021680.2.1	Tomato	nucleus	82.32	89.24
VIT_10s0003g05740.t01	Wine grape	nucleus, plastid	41.89	55.45
CDY69417	Canola	nucleus	28.09	50.22
HORVU2Hr1G102740.3	Barley	nucleus	34.62	45.83
Bra041029.1-P	Field mustard	nucleus	41.89	42.51
CDY09551	Canola	nucleus	42.13	42.13
KRH42254	Soybean	nucleus	42.86	41.26
Os04t0597300-01	Rice	nucleus	40.92	40.82
KRH58373	Soybean	nucleus	42.13	40.47
Bra005388.1-P	Field mustard	nucleus	38.26	39.21
CDY52525	Canola	nucleus	38.98	38.61
CDY43651	Canola	nucleus	38.74	38.46
AT2G34830.2	Thale cress	nucleus	40.19	38.07
Bra021934.1-P	Field mustard	nucleus	36.32	37.88
GSMUA_Achr9P03020_001	Banana	nucleus	37.05	37.23
TraesCS2D01G443000.1	Wheat	nucleus	43.1	34.97
TraesCS6D01G247200.1	Wheat	nucleus	40.68	34.93
TraesCS6A01G267500.1	Wheat	nucleus	40.68	34.93
TraesCS2B01G465000.1	Wheat	nucleus	42.62	34.92
Os02t0698800-01	Rice	nucleus	42.62	34.78
TraesCS6B01G294900.1	Wheat	nucleus	40.68	34.78
TraesCS2A01G443800.1	Wheat	nucleus	42.86	34.77
PGSC0003DMT400027378	Potato	nucleus	16.95	33.65
KXG27029	Sorghum	nucleus	40.68	33.27
Zm00001d002452_P001	Maize	nucleus	40.68	33.27
Zm00001d051550_P001	Maize	nucleus	36.8	32.62
Zm00001d017712_P001	Maize	nucleus	37.77	32.23
EES07413	Sorghum	nucleus	38.5	31.99
PGSC0003DMT400052637	Potato	nucleus	19.37	31.25
PGSC0003DMT400073267	Potato	nucleus	22.03	30.43
Zm00001d026218_P001	Maize	nucleus	31.23	29.52
PGSC0003DMT400023272	Potato	mitochondrion, nucleus	16.95	28.69
PGSC0003DMT400000215	Potato	nucleus	22.28	26.14
HORVU6Hr1G067680.3	Barley	nucleus	32.93	24.24
PGSC0003DMT400032091	Potato	nucleus	17.68	23.78
PGSC0003DMT400024632	Potato	nucleus	17.92	22.16
PGSC0003DMT400075531	Potato	nucleus	15.25	20.19
PGSC0003DMT400064256	Potato	nucleus	15.25	19.44
PGSC0003DMT400065506	Potato	nucleus	15.5	19.16
PGSC0003DMT400020517	Potato	nucleus	16.22	18.93
PGSC0003DMT400013632	Potato	nucleus	15.01	17.46
PGSC0003DMT400038986	Potato	nucleus	14.29	17.05

Protein Annotations

EntrezGene:102579681	MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:M1B7Q5	PFAM:PF03106
EnsemblPlantsGene:PGSC0003DMG400015104	PGSC:PGSC0003DMG400015104	EnsemblPlants:PGSC0003DMT400039061	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF49
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002961361	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_006359101.1
SEG:seg	:	:	:	:	:

Description

WRKY transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400015104]

Coordinates

chr2:+:12431776..12435173

Molecular Weight (calculated)

46160.0 Da

IEP (calculated)

4.964

GRAVY (calculated)

-0.924

Length

413 amino acids

Sequence
(BLAST)

001: MENNNYQGDL ADIFRGGNNT TSGESSSTNN TVIPIPTLIS DGWQFPYSAS QIEQPTSVQD FGDPFCNLRD PLFHDLDMLQ AAASEDNIIN NNNNNESTNS
101: VFGDSSPSMR KRGNMFSRML QISPTNKLAM SACVVQNNVI GNHDDINSSK TCLMENSALQ ISSPRNTGIK RRKSQAKKVV CIPAAAPANS RQGGEVVPSD
201: LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC SARKQVERSR TDPNMLVITY TSEHNHPWPT QRNALAGSTR SQPNNSKHTN NTIIPNNPQS QTDTDEQKET
301: TNNISEYPKV KEEVAEEDVR HNHQLVEMRD DEEFSKDSYQ PIMLPDSSNQ CHEDFFADLI ELEADPLNLL FAKTLSGDIN ELGQKKDIES FNMYDWSKDG
401: NTTTSNNNNN PDT

Best Arabidopsis Sequence Match ( AT1G30650.1 )
(BLAST)

001: MCSVSELLDM ENFQGDLTDV VRGIGGHVLS PETPPSNIWP LPLSHPTPSP SDLNINPFGD PFVSMDDPLL QELNSITNSG YFSTVGDNNN NIHNNNGFLV
101: PKVFEEDHIK SQCSIFPRIR ISHSNIIHDS SPCNSPAMSA HVVAAAAAAS PRGIINVDTN SPRNCLLVDG TTFSSQIQIS SPRNLGLKRR KSQAKKVVCI
201: PAPAAMNSRS SGEVVPSDLW AWRKYGQKPI KGSPFPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPIQR NALAGSTRSS TSSSSNPNPS
301: KPSTANVNSS SIGSQNTIYL PSSTTPPPTL SSSAIKDERG DDMELENVDD DDDNQIAPYR PELHDHQHQP DDFFADLEEL EGDSLSMLLS HGCGGDGKDK
401: TTASDGISNF FGWSGDNNYN NYDDQDSRSL

Arabidopsis Description

WRKY14Probable WRKY transcription factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.