Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G443000.1 | Wheat | nucleus | 97.82 | 96.86 |
| TraesCS2A01G443800.1 | Wheat | nucleus | 97.22 | 96.27 |
| HORVU2Hr1G102740.3 | Barley | nucleus | 57.14 | 92.31 |
| Os04t0597300-01 | Rice | nucleus | 63.1 | 76.81 |
| KXG27029 | Sorghum | nucleus | 72.62 | 72.48 |
| Zm00001d002452_P001 | Maize | nucleus | 69.64 | 69.5 |
| Zm00001d026218_P001 | Maize | nucleus | 57.94 | 66.82 |
| VIT_10s0003g05740.t01 | Wine grape | nucleus, plastid | 33.53 | 54.17 |
| GSMUA_Achr5P03670_001 | Banana | nucleus | 36.11 | 53.69 |
| GSMUA_Achr4P27420_001 | Banana | nucleus | 37.9 | 52.04 |
| CDY69417 | Canola | nucleus | 23.61 | 51.52 |
| TraesCS6B01G294900.1 | Wheat | nucleus | 48.02 | 50.1 |
| Solyc02g021680.2.1 | Tomato | nucleus | 34.13 | 45.14 |
| PGSC0003DMT400039061 | Potato | nucleus | 34.92 | 42.62 |
| GSMUA_Achr2P09710_001 | Banana | nucleus | 38.1 | 41.2 |
| Bra005388.1-P | Field mustard | nucleus | 32.34 | 40.45 |
| TraesCS1B01G212000.1 | Wheat | nucleus | 27.18 | 40.18 |
| Bra041029.1-P | Field mustard | nucleus | 32.14 | 39.8 |
| CDY09551 | Canola | nucleus | 32.34 | 39.47 |
| AT2G34830.2 | Thale cress | nucleus | 33.93 | 39.22 |
| CDY52525 | Canola | nucleus | 32.34 | 39.09 |
| CDY43651 | Canola | nucleus | 32.14 | 38.94 |
| KRH36880 | Soybean | nucleus | 38.69 | 37.94 |
| KRH11863 | Soybean | nucleus | 39.09 | 37.67 |
| Bra021934.1-P | Field mustard | nucleus | 29.56 | 37.63 |
| KRH42254 | Soybean | nucleus | 30.75 | 36.13 |
| KRH58373 | Soybean | nucleus | 30.56 | 35.81 |
| TraesCS5B01G558100.2 | Wheat | nucleus | 25.4 | 34.5 |
| TraesCS3B01G255400.1 | Wheat | nucleus | 19.25 | 30.41 |
| TraesCS3B01G324400.1 | Wheat | nucleus | 16.87 | 29.51 |
| TraesCS3B01G315600.1 | Wheat | cytosol | 16.67 | 28.28 |
| TraesCS1B01G455000.1 | Wheat | nucleus | 16.47 | 27.76 |
| TraesCS7B01G240000.1 | Wheat | nucleus | 17.06 | 24.29 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 13.69 | 23.15 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 13.29 | 22.41 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 13.69 | 22.04 |
| TraesCS4B01G069500.2 | Wheat | nucleus | 13.69 | 20.29 |
| TraesCS5B01G066400.1 | Wheat | nucleus | 13.1 | 18.59 |
| TraesCS5B01G384600.1 | Wheat | nucleus | 12.7 | 16.0 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF49 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS2B01G465000 |
| EnsemblPlants:TraesCS2B01G465000.1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2B:-:659532569..659536596
Molecular Weight (calculated)
53074.0 Da
IEP (calculated)
6.575
GRAVY (calculated)
-0.628
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MCDYFLQRME GDQAGGGDLT DIVRAGGAMP GNNDGDGTNL PSTAAEWHLQ PADQPMLFPP PPPSASPGTG GDVFGDPFAG LGDPFSSDYS SGAPEFLEGM
101: PDAMAKIGFE AGAGGGVNGC GGGGGQMFDM SRKPLLPRGM QMMPAGIGGG MGPRLMQSSL SPIAIRPYPA MTAGDMVKLG ITPGQAAGCA IDAAIGGMQM
201: SSSPRNNNSG IKRRKNQARK VVCIPAPTTA GSRPTGEVVP SDLWAWRKYG QKPIKGSPHP RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW
301: PTQRNALAGS TRSHHGKNGG GGGSGSGSKS SHNEKQTQNQ NVKEERKDHR AAATTTATTT TSTVTTTTST SPVVVKEETL AGSSSEAQAR DQRALDTVAG
401: VLQQVDHREL MDHVFSESYR PMIPESGQHH ENFFADFADL AELESDPMSL IFSKEYMEAR PSGGAGDHGG QEKAVAKELD PFDMLDWSTT SSTAGSTFEQ
501: GKRG
101: PDAMAKIGFE AGAGGGVNGC GGGGGQMFDM SRKPLLPRGM QMMPAGIGGG MGPRLMQSSL SPIAIRPYPA MTAGDMVKLG ITPGQAAGCA IDAAIGGMQM
201: SSSPRNNNSG IKRRKNQARK VVCIPAPTTA GSRPTGEVVP SDLWAWRKYG QKPIKGSPHP RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW
301: PTQRNALAGS TRSHHGKNGG GGGSGSGSKS SHNEKQTQNQ NVKEERKDHR AAATTTATTT TSTVTTTTST SPVVVKEETL AGSSSEAQAR DQRALDTVAG
401: VLQQVDHREL MDHVFSESYR PMIPESGQHH ENFFADFADL AELESDPMSL IFSKEYMEAR PSGGAGDHGG QEKAVAKELD PFDMLDWSTT SSTAGSTFEQ
501: GKRG
001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL
Arabidopsis Description
WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.