Factsheet for GSMUA_Achr4P27420_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P03670_001	Banana	nucleus	52.59	56.93
GSMUA_Achr11P...	Banana	nucleus	47.68	47.17
HORVU2Hr1G102740.3	Barley	nucleus	38.96	45.83
GSMUA_Achr8P14610_001	Banana	nucleus	47.96	45.71
GSMUA_Achr9P03020_001	Banana	nucleus	50.68	45.26
Os04t0597300-01	Rice	nucleus	50.68	44.93
GSMUA_Achr2P09710_001	Banana	nucleus	50.41	39.7
KXG27029	Sorghum	nucleus	53.13	38.61
Os02t0698800-01	Rice	nucleus	53.13	38.54
Zm00001d002452_P001	Maize	nucleus	52.59	38.22
TraesCS2A01G443800.1	Wheat	nucleus	52.59	37.92
TraesCS2B01G465000.1	Wheat	nucleus	52.04	37.9
TraesCS2D01G443000.1	Wheat	nucleus	52.32	37.72
TraesCS6D01G247200.1	Wheat	nucleus	49.05	37.42
TraesCS6A01G267500.1	Wheat	nucleus	49.05	37.42
TraesCS6B01G294900.1	Wheat	nucleus	48.77	37.06
GSMUA_Achr11P...	Banana	nucleus	39.51	36.99
Zm00001d051550_P001	Maize	nucleus	46.87	36.91
EES07413	Sorghum	nucleus	49.32	36.42
Zm00001d017712_P001	Maize	nucleus	47.41	35.95
Zm00001d026218_P001	Maize	nucleus	40.33	33.87
GSMUA_Achr10P...	Banana	nucleus	26.7	32.67
GSMUA_Achr7P24840_001	Banana	nucleus	21.53	31.85
GSMUA_Achr10P...	Banana	nucleus	26.43	31.8
GSMUA_Achr4P08360_001	Banana	nucleus	21.53	30.62
GSMUA_Achr5P09430_001	Banana	nucleus	27.25	29.41
GSMUA_Achr7P14300_001	Banana	nucleus	24.52	28.94
GSMUA_Achr8P27790_001	Banana	nucleus	19.07	28.93
GSMUA_Achr8P19810_001	Banana	nucleus	27.25	28.57
GSMUA_Achr9P05460_001	Banana	nucleus	28.34	28.57
GSMUA_Achr3P15690_001	Banana	nucleus	19.62	28.35
GSMUA_Achr1P05010_001	Banana	nucleus	27.25	27.1
GSMUA_Achr4P15540_001	Banana	nucleus	20.71	26.57
GSMUA_Achr6P31840_001	Banana	nucleus	26.98	25.71
HORVU6Hr1G067680.3	Barley	nucleus	38.42	25.13
GSMUA_Achr9P22950_001	Banana	nucleus	19.07	24.91
GSMUA_Achr10P...	Banana	nucleus	17.17	23.6
GSMUA_Achr5P21910_001	Banana	nucleus	16.35	23.53
GSMUA_Achr6P03810_001	Banana	nucleus	16.08	22.96
GSMUA_Achr7P15930_001	Banana	nucleus	17.17	22.34
GSMUA_Achr3P05670_001	Banana	nucleus	16.35	21.74
GSMUA_Achr4P20600_001	Banana	nucleus	16.62	21.63
GSMUA_Achr8P20660_001	Banana	nucleus	14.71	21.34
GSMUA_Achr3P29310_001	Banana	nucleus	16.08	21.3
GSMUA_Achr3P27880_001	Banana	nucleus	15.8	21.09
GSMUA_Achr9P10740_001	Banana	nucleus	14.44	20.7
GSMUA_Achr10P...	Banana	plastid	25.07	20.49
GSMUA_Achr3P00510_001	Banana	nucleus	14.71	20.45
GSMUA_Achr1P23560_001	Banana	nucleus	16.62	20.13
GSMUA_Achr4P03660_001	Banana	nucleus	14.71	20.0
GSMUA_Achr5P04870_001	Banana	nucleus	15.53	19.13
GSMUA_Achr5P20810_001	Banana	nucleus	14.17	18.77
GSMUA_Achr10P...	Banana	nucleus	14.99	18.21
GSMUA_Achr9P21560_001	Banana	nucleus	16.08	16.16
GSMUA_Achr2P17580_001	Banana	nucleus	12.81	15.67

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr4G27420_001	EnsemblPlants:GSMUA_Achr4P27420_001	EnsemblPlants:GSMUA_Achr4T27420_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0SSK4	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000294AD5C	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

OsWRKY37 - Superfamily of TFs having WRKY and zinc finger domains, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G27420_001]

Coordinates

chr4:+:26258926..26260700

Molecular Weight (calculated)

40229.1 Da

IEP (calculated)

6.946

GRAVY (calculated)

-0.752

Length

367 amino acids

Sequence
(BLAST)

001: MCDYFWHRME NDSGELADIV RAGGRSGPSN TEFEPVAAEW RLPSHPPVFF PTRAEIPTNA FGDPFLLLTS EQEMKGPCNV FSRAVHQISP GGSSMSSKPS
101: LLPSRLVRPS PASSGSIAGP ADHGGGVQQI SSPRPPVIKR RKNQAKKVVC IPAPPPAAAG NRLSGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG
201: CSARKQVERS RTDPNMLVIT YTSDHNHPWP TQRNALAGST RSQPSKNGPR NNLKEEPNKE TTSSSGHMVK EEEIGEMEKT IEQAGDTLGF DPMIHPSYKS
301: DQPDDLFAGL AELEGDPMSL IFSRGFMESK PDEEKGVGAS DAFDMFDWAG GSSRSQEEEV YYKTLEK

Best Arabidopsis Sequence Match ( AT2G34830.2 )
(BLAST)

001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.