Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P29310_001 | Banana | nucleus | 72.96 | 71.12 |
| GSMUA_Achr8P20660_001 | Banana | nucleus | 62.59 | 66.8 |
| GSMUA_Achr9P10740_001 | Banana | nucleus | 63.33 | 66.8 |
| GSMUA_Achr9P21560_001 | Banana | nucleus | 75.93 | 56.16 |
| GSMUA_Achr10P... | Banana | nucleus | 61.48 | 54.97 |
| Bra021652.1-P | Field mustard | nucleus | 55.19 | 46.42 |
| GSMUA_Achr2P17580_001 | Banana | nucleus | 51.48 | 46.33 |
| CDY29658 | Canola | nucleus | 55.19 | 46.27 |
| CDX97806 | Canola | nucleus | 56.3 | 46.06 |
| Bra022808.1-P | Field mustard | nucleus | 56.67 | 45.27 |
| CDX84824 | Canola | nucleus | 56.67 | 45.27 |
| CDY23988 | Canola | nucleus | 56.3 | 44.71 |
| CDY10749 | Canola | nucleus | 54.44 | 44.01 |
| Bra018303.1-P | Field mustard | nucleus | 54.07 | 43.58 |
| CDY47130 | Canola | nucleus | 54.81 | 43.15 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 44.07 | 42.2 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 43.7 | 41.84 |
| GSMUA_Achr10P... | Banana | nucleus | 40.37 | 40.82 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 38.52 | 40.78 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 39.63 | 40.53 |
| AT2G30590.1 | Thale cress | nucleus | 56.67 | 40.26 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 41.48 | 39.86 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 37.78 | 39.69 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 40.37 | 39.49 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 42.59 | 37.95 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 39.63 | 35.91 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 35.56 | 34.91 |
| GSMUA_Achr5P20810_001 | Banana | nucleus | 31.11 | 30.32 |
| GSMUA_Achr7P24840_001 | Banana | nucleus | 19.26 | 20.97 |
| GSMUA_Achr3P15690_001 | Banana | nucleus | 18.89 | 20.08 |
| GSMUA_Achr4P08360_001 | Banana | nucleus | 18.52 | 19.38 |
| GSMUA_Achr8P27790_001 | Banana | nucleus | 17.04 | 19.01 |
| GSMUA_Achr7P14300_001 | Banana | nucleus | 21.48 | 18.65 |
| GSMUA_Achr4P15540_001 | Banana | nucleus | 19.26 | 18.18 |
| GSMUA_Achr11P... | Banana | nucleus | 25.93 | 17.86 |
| GSMUA_Achr10P... | Banana | nucleus | 20.0 | 17.7 |
| GSMUA_Achr10P... | Banana | nucleus | 19.63 | 17.67 |
| GSMUA_Achr5P09430_001 | Banana | nucleus | 21.48 | 17.06 |
| GSMUA_Achr5P03670_001 | Banana | nucleus | 20.74 | 16.52 |
| GSMUA_Achr8P19810_001 | Banana | nucleus | 20.74 | 16.0 |
| GSMUA_Achr9P05460_001 | Banana | nucleus | 21.11 | 15.66 |
| GSMUA_Achr6P31840_001 | Banana | nucleus | 21.85 | 15.32 |
| GSMUA_Achr1P05010_001 | Banana | nucleus | 20.74 | 15.18 |
| GSMUA_Achr11P... | Banana | nucleus | 20.74 | 15.09 |
| GSMUA_Achr8P14610_001 | Banana | nucleus | 21.48 | 15.06 |
| GSMUA_Achr4P27420_001 | Banana | nucleus | 20.0 | 14.71 |
| GSMUA_Achr9P03020_001 | Banana | nucleus | 21.11 | 13.87 |
| GSMUA_Achr2P09710_001 | Banana | nucleus | 20.37 | 11.8 |
| GSMUA_Achr10P... | Banana | plastid | 17.78 | 10.69 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr4G03660_001 | EnsemblPlants:GSMUA_Achr4P03660_001 | EnsemblPlants:GSMUA_Achr4T03660_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0SKT3 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF12 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000295917F | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom |
| SEG:seg | : | : | : | : | : |
Description
Putative Probable WRKY transcription factor 74 [Source:GMGC_GENE;Acc:GSMUA_Achr4G03660_001]
Coordinates
chr4:-:2920672..2922203
Molecular Weight (calculated)
29750.4 Da
IEP (calculated)
10.071
GRAVY (calculated)
-0.667
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVEEANRA AVESCYRVLS LLSETQDRAL AYKDLMADTG KAVSRFNKVI SMLSNGVGHA RPRRLHDPQQ LHFNHGIFLD SPAVSRADQS PLAMCGRSNS
101: GMNLKFDNSS CAATVSSSRS FLSSLSMDGS MDGKAFNLIG GSQSSNPMNW QLHNRRRCTG GGEDGNGKCA RTGRCHCSKK RKLRVKRTIK VPAISNKLAD
201: IPADDYSWRK YGQKPIKGSP HPRGYYKCSS MRGCPARKHV ERCVEDPTML MVTYEGEHNH AKLATQSAHT
101: GMNLKFDNSS CAATVSSSRS FLSSLSMDGS MDGKAFNLIG GSQSSNPMNW QLHNRRRCTG GGEDGNGKCA RTGRCHCSKK RKLRVKRTIK VPAISNKLAD
201: IPADDYSWRK YGQKPIKGSP HPRGYYKCSS MRGCPARKHV ERCVEDPTML MVTYEGEHNH AKLATQSAHT
001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
Arabidopsis Description
WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.