Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g066010.2.1 | Tomato | nucleus | 91.04 | 95.17 |
| PGSC0003DMT400013632 | Potato | nucleus | 78.61 | 76.62 |
| KRH71315 | Soybean | nucleus | 72.25 | 70.42 |
| KRH67313 | Soybean | nucleus | 65.32 | 66.28 |
| KRH32116 | Soybean | extracellular | 69.94 | 61.73 |
| GSMUA_Achr10P... | Banana | nucleus | 52.89 | 60.6 |
| Bra040396.1-P | Field mustard | nucleus | 48.55 | 55.45 |
| AT3G04670.1 | Thale cress | nucleus | 52.31 | 54.85 |
| CDY40667 | Canola | nucleus | 50.29 | 54.72 |
| CDY50747 | Canola | nucleus | 47.69 | 54.46 |
| Bra001117.1-P | Field mustard | nucleus | 50.0 | 54.23 |
| CDX74175 | Canola | nucleus | 49.71 | 53.58 |
| CDY41890 | Canola | nucleus | 48.27 | 53.35 |
| AT5G28650.1 | Thale cress | nucleus | 50.29 | 52.73 |
| TraesCS4B01G069500.2 | Wheat | nucleus | 51.16 | 52.06 |
| CDY48658 | Canola | nucleus | 50.58 | 51.93 |
| TraesCS4D01G068200.1 | Wheat | nucleus | 51.16 | 51.91 |
| CDX86205 | Canola | nucleus | 51.16 | 51.91 |
| Bra010005.1-P | Field mustard | nucleus | 51.16 | 51.91 |
| CDY33884 | Canola | nucleus | 50.0 | 51.34 |
| Bra020617.1-P | Field mustard | nucleus | 50.0 | 51.34 |
| TraesCS4A01G246000.2 | Wheat | nucleus | 51.73 | 51.29 |
| EER91209 | Sorghum | nucleus | 51.45 | 50.57 |
| CDY05601 | Canola | nucleus | 49.13 | 50.45 |
| TraesCS5B01G066400.1 | Wheat | nucleus | 51.45 | 50.14 |
| TraesCS5D01G070700.1 | Wheat | nucleus | 51.45 | 50.0 |
| Os12t0597700-01 | Rice | nucleus | 52.31 | 49.86 |
| TraesCS5A01G059100.1 | Wheat | nucleus | 51.16 | 49.86 |
| Zm00001d033291_P007 | Maize | nucleus | 50.0 | 48.87 |
| Os03t0741400-01 | Rice | nucleus | 53.47 | 47.8 |
| Zm00001d041397_P001 | Maize | nucleus | 50.58 | 47.68 |
| EES17321 | Sorghum | nucleus | 50.87 | 47.44 |
| Zm00001d013709_P003 | Maize | nucleus | 50.29 | 47.15 |
| Zm00001d033965_P001 | Maize | nucleus | 53.18 | 46.35 |
| Zm00001d013307_P003 | Maize | nucleus | 52.31 | 45.82 |
| Zm00001d030969_P001 | Maize | nucleus | 49.42 | 45.72 |
| EER93478 | Sorghum | nucleus | 51.73 | 44.09 |
| HORVU4Hr1G011590.2 | Barley | nucleus, plastid | 51.45 | 43.2 |
| TraesCS5D01G390800.1 | Wheat | nucleus | 48.84 | 42.89 |
| HORVU5Hr1G094050.1 | Barley | nucleus | 48.55 | 42.53 |
| TraesCS5A01G381000.1 | Wheat | nucleus | 48.27 | 42.07 |
| TraesCS5B01G384600.1 | Wheat | nucleus | 47.98 | 41.5 |
| PGSC0003DMT400064256 | Potato | nucleus | 36.13 | 38.58 |
| PGSC0003DMT400020517 | Potato | nucleus | 37.28 | 36.44 |
| PGSC0003DMT400065506 | Potato | nucleus | 34.39 | 35.63 |
| PGSC0003DMT400024632 | Potato | nucleus | 33.53 | 34.73 |
| PGSC0003DMT400075531 | Potato | nucleus | 30.64 | 33.97 |
| PGSC0003DMT400027378 | Potato | nucleus | 14.45 | 24.04 |
| PGSC0003DMT400052637 | Potato | nucleus | 16.47 | 22.27 |
| PGSC0003DMT400073267 | Potato | nucleus | 17.05 | 19.73 |
| PGSC0003DMT400023272 | Potato | mitochondrion, nucleus | 13.87 | 19.67 |
| PGSC0003DMT400000215 | Potato | nucleus | 19.36 | 19.03 |
| PGSC0003DMT400032091 | Potato | nucleus | 14.74 | 16.61 |
| PGSC0003DMT400039061 | Potato | nucleus | 17.05 | 14.29 |
Protein Annotations
| EntrezGene:102585500 | MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1B7N3 |
| PFAM:PF03106 | PFAM:PF10533 | EnsemblPlantsGene:PGSC0003DMG400015076 | PGSC:PGSC0003DMG400015076 | EnsemblPlants:PGSC0003DMT400038986 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF12 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000295AF83 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | RefSeq:XP_006351633.1 | InterPro:Zn-cluster-dom | SEG:seg | : | : |
Description
WRKY transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400015076]
Coordinates
chr9:+:49139319..49141836
Molecular Weight (calculated)
39106.6 Da
IEP (calculated)
10.101
GRAVY (calculated)
-0.841
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIEEANRV AVESCHRVIT MLSQPHDEKQ FGNLVRETGE AVHKFKKVVT LLNSNLGHAR VRKAKKILTP YPHSLLLENP SCKIDDPPKP LQLLPITYPE
101: NIRLENGSNV NRIHPSLELN SHGKNPLQLA QQTPLSSYHF TQQQQQLQQQ QQRRYQLQQQ QMKQQADMMY RRSNSGISLN FDSSACTPTM SSTRSFISSL
201: SIDGSVANLD GNAFHFIGAS RSADQSSFQH KKRCSGRGDE GSVKCGSSGR CHCSKKRKHR VKRSIKVPAI SNKLADIPPD EYSWRKYGQK PIKGSPHPRG
301: YYKCSSMRGC PARKHVERCL EEPSMLIVTY EGEHNHPRLP SQSANA
101: NIRLENGSNV NRIHPSLELN SHGKNPLQLA QQTPLSSYHF TQQQQQLQQQ QQRRYQLQQQ QMKQQADMMY RRSNSGISLN FDSSACTPTM SSTRSFISSL
201: SIDGSVANLD GNAFHFIGAS RSADQSSFQH KKRCSGRGDE GSVKCGSSGR CHCSKKRKHR VKRSIKVPAI SNKLADIPPD EYSWRKYGQK PIKGSPHPRG
301: YYKCSSMRGC PARKHVERCL EEPSMLIVTY EGEHNHPRLP SQSANA
001: MEEIEGTNRA AVESCHRVLN LLHRSQQQDH VGFEKNLVSE TREAVIRFKR VGSLLSSSVG HARFRRAKKL QSHVSQSLLL DPCQQRTTEV PSSSSQKTPV
101: LRSGFQELSL RQPSDSLTLG TRSFSLNSNA KAPLLQLNQQ TMPPSNYPTL FPVQQQQQQQ QQQQQQEQQQ QQQQQQQQFH ERLQAHHLHQ QQQLQKHQAE
201: LMLRKCNGGI SLSFDNSSCT PTMSSTRSFV SSLSIDGSVA NIEGKNSFHF GVPSSTDQNS LHSKRKCPLK GDEHGSLKCG SSSRCHCAKK RKHRVRRSIR
301: VPAISNKVAD IPPDDYSWRK YGQKPIKGSP YPRGYYKCSS MRGCPARKHV ERCLEDPAML IVTYEAEHNH PKLPSQAITT
101: LRSGFQELSL RQPSDSLTLG TRSFSLNSNA KAPLLQLNQQ TMPPSNYPTL FPVQQQQQQQ QQQQQQEQQQ QQQQQQQQFH ERLQAHHLHQ QQQLQKHQAE
201: LMLRKCNGGI SLSFDNSSCT PTMSSTRSFV SSLSIDGSVA NIEGKNSFHF GVPSSTDQNS LHSKRKCPLK GDEHGSLKCG SSSRCHCAKK RKHRVRRSIR
301: VPAISNKVAD IPPDDYSWRK YGQKPIKGSP YPRGYYKCSS MRGCPARKHV ERCLEDPAML IVTYEAEHNH PKLPSQAITT
Arabidopsis Description
WRKY21Probable WRKY transcription factor 21 [Source:UniProtKB/Swiss-Prot;Acc:O04336]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.