Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G28650.1 | CDY57144 | AT3G56800.1 | 15733871 |
| AT5G28650.1 | CDY65072 | AT3G56800.1 | 15733871 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010005.1-P | Field mustard | nucleus | 96.14 | 95.01 |
| CDX86205 | Canola | nucleus | 96.14 | 95.01 |
| AT5G28650.1 | Thale cress | nucleus | 84.87 | 86.67 |
| CDY33884 | Canola | nucleus | 85.76 | 85.76 |
| CDY05601 | Canola | nucleus | 85.46 | 85.46 |
| CDX74175 | Canola | nucleus | 71.22 | 74.77 |
| CDY40667 | Canola | nucleus | 70.03 | 74.21 |
| CDY50747 | Canola | nucleus | 64.99 | 72.28 |
| CDY41890 | Canola | nucleus | 67.06 | 72.2 |
| VIT_07s0141g00680.t01 | Wine grape | nucleus | 53.12 | 52.65 |
| Solyc09g066010.2.1 | Tomato | nucleus | 51.63 | 52.57 |
| GSMUA_Achr10P... | Banana | nucleus | 45.7 | 50.99 |
| PGSC0003DMT400038986 | Potato | nucleus | 51.93 | 50.58 |
| Solyc06g008610.2.1 | Tomato | nucleus | 50.74 | 49.14 |
| TraesCS4B01G069500.2 | Wheat | nucleus | 49.55 | 49.12 |
| TraesCS4D01G068200.1 | Wheat | nucleus | 49.55 | 48.97 |
| EER91209 | Sorghum | nucleus | 51.04 | 48.86 |
| TraesCS4A01G246000.2 | Wheat | nucleus | 50.45 | 48.71 |
| KRH71315 | Soybean | nucleus | 50.74 | 48.17 |
| PGSC0003DMT400013632 | Potato | nucleus | 50.45 | 47.89 |
| Zm00001d033291_P007 | Maize | nucleus | 50.15 | 47.74 |
| KRH67313 | Soybean | nucleus | 47.77 | 47.21 |
| TraesCS5A01G059100.1 | Wheat | nucleus | 48.96 | 46.48 |
| TraesCS5B01G066400.1 | Wheat | nucleus | 48.96 | 46.48 |
| TraesCS5D01G070700.1 | Wheat | nucleus | 48.96 | 46.35 |
| CDX84824 | Canola | nucleus | 46.29 | 46.15 |
| CDY10749 | Canola | nucleus | 45.4 | 45.81 |
| CDY29658 | Canola | nucleus | 43.62 | 45.65 |
| Os12t0597700-01 | Rice | nucleus | 48.66 | 45.18 |
| CDX97806 | Canola | nucleus | 43.92 | 44.85 |
| Zm00001d013709_P003 | Maize | nucleus | 48.96 | 44.72 |
| CDY23988 | Canola | nucleus | 45.1 | 44.71 |
| EES17321 | Sorghum | nucleus | 48.96 | 44.47 |
| CDY47130 | Canola | nucleus | 45.1 | 44.31 |
| Zm00001d041397_P001 | Maize | nucleus | 47.77 | 43.87 |
| KRH32116 | Soybean | extracellular | 50.45 | 43.37 |
| Zm00001d030969_P001 | Maize | nucleus | 47.48 | 42.78 |
| HORVU4Hr1G011590.2 | Barley | nucleus, plastid | 50.15 | 41.02 |
| Os03t0741400-01 | Rice | nucleus | 46.88 | 40.83 |
| Zm00001d033965_P001 | Maize | nucleus | 45.99 | 39.04 |
| Zm00001d013307_P003 | Maize | nucleus | 45.4 | 38.73 |
| CDY20325 | Canola | nucleus | 32.05 | 38.16 |
| EER93478 | Sorghum | nucleus | 45.4 | 37.68 |
| HORVU5Hr1G094050.1 | Barley | nucleus | 43.62 | 37.22 |
| TraesCS5D01G390800.1 | Wheat | nucleus | 43.32 | 37.06 |
| TraesCS5B01G384600.1 | Wheat | nucleus | 43.62 | 36.75 |
| CDY60852 | Canola | nucleus | 32.34 | 36.58 |
| TraesCS5A01G381000.1 | Wheat | nucleus | 43.03 | 36.52 |
| CDX72310 | Canola | nucleus | 30.56 | 36.27 |
| CDX68763 | Canola | nucleus | 32.05 | 36.24 |
| CDY13441 | Canola | nucleus | 31.45 | 36.18 |
| CDY36432 | Canola | nucleus | 29.97 | 35.82 |
| CDX89558 | Canola | nucleus | 30.86 | 34.9 |
| CDY45583 | Canola | nucleus | 33.53 | 34.77 |
| CDY23304 | Canola | nucleus | 31.45 | 34.64 |
| CDY38936 | Canola | nucleus | 30.86 | 34.21 |
| CDY03470 | Canola | nucleus | 32.64 | 32.54 |
| CDY10996 | Canola | nucleus | 30.86 | 29.97 |
| CDX92626 | Canola | nucleus | 30.86 | 29.89 |
| CDY34269 | Canola | nucleus | 32.05 | 26.93 |
| CDX71933 | Canola | nucleus | 14.54 | 24.62 |
| CDX90180 | Canola | nucleus | 15.13 | 19.54 |
| CDX99806 | Canola | nucleus | 14.84 | 19.16 |
| CDY69417 | Canola | nucleus | 13.06 | 19.05 |
| CDY01962 | Canola | nucleus | 16.32 | 18.9 |
| CDY07185 | Canola | nucleus | 16.32 | 18.84 |
| CDY50779 | Canola | nucleus | 14.54 | 18.7 |
| CDY48511 | Canola | nucleus | 16.32 | 18.46 |
| CDY49246 | Canola | nucleus | 14.54 | 18.08 |
| CDX89000 | Canola | nucleus | 14.84 | 17.92 |
| CDY00583 | Canola | nucleus | 14.84 | 17.92 |
| CDX94201 | Canola | nucleus | 15.13 | 17.06 |
| CDY10943 | Canola | nucleus | 15.13 | 17.06 |
| CDY59336 | Canola | nucleus | 14.84 | 16.89 |
| CDY27045 | Canola | nucleus | 17.21 | 16.86 |
| CDX96157 | Canola | nucleus | 17.21 | 16.67 |
| CDX77581 | Canola | nucleus | 18.69 | 16.67 |
| CDX76334 | Canola | nucleus | 15.13 | 16.56 |
| CDY41375 | Canola | nucleus | 15.13 | 16.56 |
| CDX98217 | Canola | nucleus | 18.69 | 16.36 |
| CDY44115 | Canola | nucleus | 14.24 | 16.22 |
| CDY09551 | Canola | nucleus | 18.4 | 15.01 |
| CDY52525 | Canola | nucleus | 18.1 | 14.63 |
| CDY43651 | Canola | nucleus | 16.91 | 13.7 |
| CDY72268 | Canola | cytosol, plastid | 0.89 | 2.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078IHR2 | UniProt:A0A078IHR2 | EnsemblPlants:CDY48658 | ProteinID:CDY48658 |
| ProteinID:CDY48658.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00091521001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF12 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF3692 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : | : | : |
Description
BnaC07g27510DBnaC07g27510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHR2]
Coordinates
chrLK032785:-:50162..52184
Molecular Weight (calculated)
37591.3 Da
IEP (calculated)
10.105
GRAVY (calculated)
-0.570
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVEAANKA AVESCHGVLN LLSQQTNDPK SLLVETREAV IKFKRVTSLL TRGLGGQRKI KKLNSNNYYK FMSPLLPQHI FLESPICSNN AITGCVPVLA
101: PKPLQVIPPA APSYGEQRPV HPPPMMLNHK MCVDKSFLEL KPPSLRAVDQ KPYQFIRNHQ QGVYYRSNSG LNLKFDGCYS PSVSNGSRSF VSSLSMDGSV
201: TDYDRNSFHL IGLPQGSDHI SQHSRRTSCS GSLKCGNKSK CHCSKKRKLR VKRSIKVPAI SNKIADIPPD EYSWRKYGQK PIKGSPHPRG YYKCSSVRGC
301: PARKHVERCV DEASMLIVSY EGEHNHARML SSQSAHT
101: PKPLQVIPPA APSYGEQRPV HPPPMMLNHK MCVDKSFLEL KPPSLRAVDQ KPYQFIRNHQ QGVYYRSNSG LNLKFDGCYS PSVSNGSRSF VSSLSMDGSV
201: TDYDRNSFHL IGLPQGSDHI SQHSRRTSCS GSLKCGNKSK CHCSKKRKLR VKRSIKVPAI SNKIADIPPD EYSWRKYGQK PIKGSPHPRG YYKCSSVRGC
301: PARKHVERCV DEASMLIVSY EGEHNHARML SSQSAHT
001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT
Arabidopsis Description
WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.