Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31550.1 | CDY57144 | AT3G56800.1 | 15733871 |
| AT4G31550.1 | CDY65072 | AT3G56800.1 | 15733871 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010231.1-P | Field mustard | nucleus | 99.67 | 91.87 |
| CDY36432 | Canola | nucleus | 84.64 | 91.84 |
| CDX68763 | Canola | nucleus | 79.41 | 81.54 |
| CDY60852 | Canola | nucleus | 76.8 | 78.86 |
| CDX72310 | Canola | nucleus | 71.9 | 77.46 |
| CDY13441 | Canola | nucleus | 72.88 | 76.11 |
| AT4G31550.1 | Thale cress | nucleus | 79.08 | 74.46 |
| CDY20325 | Canola | nucleus | 65.03 | 70.32 |
| CDY45583 | Canola | nucleus | 72.22 | 68.0 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 53.92 | 58.51 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 62.09 | 56.21 |
| GSMUA_Achr10P... | Banana | nucleus | 48.37 | 55.43 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 49.35 | 54.71 |
| VIT_11s0052g00450.t01 | Wine grape | nucleus | 43.46 | 54.29 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 44.77 | 53.73 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 48.37 | 52.67 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 50.98 | 52.35 |
| KRH02746 | Soybean | nucleus | 53.59 | 51.25 |
| PGSC0003DMT400075531 | Potato | nucleus | 51.63 | 50.64 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 51.63 | 50.48 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 43.46 | 50.38 |
| Zm00001d002405_P001 | Maize | nucleus | 49.02 | 50.34 |
| KRH19120 | Soybean | nucleus | 53.27 | 50.31 |
| Os04t0605100-01 | Rice | nucleus | 50.65 | 50.16 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 51.31 | 50.16 |
| EES11384 | Sorghum | nucleus | 51.31 | 49.84 |
| Os04t0287400-01 | Rice | nucleus | 52.94 | 49.69 |
| TraesCS2A01G270200.2 | Wheat | nucleus | 51.63 | 49.38 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 45.42 | 49.29 |
| Zm00001d026252_P001 | Maize | nucleus | 50.65 | 49.05 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 48.37 | 48.84 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 51.31 | 48.46 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 24.18 | 48.37 |
| PGSC0003DMT400024632 | Potato | nucleus | 52.61 | 48.2 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 51.31 | 47.87 |
| Solyc08g006320.2.1 | Tomato | nucleus | 50.98 | 47.56 |
| Zm00001d004086_P001 | Maize | nucleus | 51.31 | 47.43 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 45.1 | 46.15 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 38.56 | 45.91 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 44.77 | 45.67 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 43.46 | 44.63 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 43.14 | 44.59 |
| HORVU5Hr1G092770.2 | Barley | mitochondrion | 43.46 | 44.48 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 42.48 | 44.07 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 42.81 | 43.96 |
| Solyc12g096350.1.1 | Tomato | nucleus | 48.04 | 43.49 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 37.91 | 42.18 |
| Os02t0462800-01 | Rice | nucleus | 33.99 | 41.11 |
| Os08t0235800-00 | Rice | nucleus | 46.08 | 40.99 |
| CDY38936 | Canola | nucleus | 40.2 | 40.46 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 39.87 | 40.4 |
| Zm00001d024376_P001 | Maize | nucleus | 40.85 | 40.19 |
| OQU84894 | Sorghum | nucleus | 39.22 | 40.13 |
| EES14755 | Sorghum | nucleus | 41.5 | 39.94 |
| CDX89558 | Canola | nucleus | 38.89 | 39.93 |
| Zm00001d050195_P001 | Maize | nucleus | 39.22 | 39.22 |
| HORVU5Hr1G122800.4 | Barley | plastid | 31.7 | 37.6 |
| CDY03470 | Canola | nucleus | 40.52 | 36.69 |
| Zm00001d016457_P001 | Maize | nucleus | 38.89 | 36.62 |
| CDY50747 | Canola | nucleus | 35.29 | 35.64 |
| CDX92626 | Canola | nucleus | 40.52 | 35.63 |
| CDY10996 | Canola | nucleus | 39.87 | 35.16 |
| CDY41890 | Canola | nucleus | 35.29 | 34.5 |
| CDY40667 | Canola | nucleus | 35.62 | 34.28 |
| CDX74175 | Canola | nucleus | 35.95 | 34.27 |
| HORVU5Hr1G052630.2 | Barley | plastid | 27.12 | 32.94 |
| CDY29658 | Canola | nucleus | 33.66 | 31.99 |
| CDY10749 | Canola | nucleus | 34.64 | 31.74 |
| CDY05601 | Canola | nucleus | 34.64 | 31.45 |
| CDY33884 | Canola | nucleus | 34.64 | 31.45 |
| CDY48658 | Canola | nucleus | 34.64 | 31.45 |
| CDX86205 | Canola | nucleus | 34.97 | 31.38 |
| CDX97806 | Canola | nucleus | 33.66 | 31.21 |
| CDY47130 | Canola | nucleus | 34.97 | 31.2 |
| CDX84824 | Canola | nucleus | 34.31 | 31.07 |
| CDY34269 | Canola | nucleus | 40.52 | 30.92 |
| CDY23988 | Canola | nucleus | 33.99 | 30.59 |
| HORVU3Hr1G039500.1 | Barley | plastid | 28.1 | 27.13 |
| HORVU3Hr1G097420.1 | Barley | nucleus | 27.78 | 26.65 |
| CDX71933 | Canola | nucleus | 16.67 | 25.63 |
| CDY07185 | Canola | nucleus | 20.26 | 21.23 |
| CDX90180 | Canola | nucleus | 17.97 | 21.07 |
| CDY48511 | Canola | nucleus | 20.26 | 20.81 |
| CDY69417 | Canola | nucleus | 15.69 | 20.78 |
| CDX99806 | Canola | nucleus | 17.65 | 20.69 |
| CDY01962 | Canola | nucleus | 19.61 | 20.62 |
| CDY50779 | Canola | nucleus | 17.32 | 20.23 |
| CDY49246 | Canola | nucleus | 16.99 | 19.19 |
| CDY10943 | Canola | nucleus | 18.3 | 18.73 |
| CDX89000 | Canola | nucleus | 16.99 | 18.64 |
| CDY00583 | Canola | nucleus | 16.99 | 18.64 |
| CDY27045 | Canola | nucleus | 20.91 | 18.6 |
| CDY59336 | Canola | nucleus | 17.97 | 18.58 |
| CDX96157 | Canola | nucleus | 20.59 | 18.1 |
| CDX94201 | Canola | nucleus | 17.65 | 18.06 |
| CDY44115 | Canola | nucleus | 17.32 | 17.91 |
| CDX76334 | Canola | nucleus | 17.97 | 17.86 |
| CDY41375 | Canola | nucleus | 17.97 | 17.86 |
| CDX77581 | Canola | nucleus | 20.26 | 16.4 |
| CDX98217 | Canola | nucleus | 20.26 | 16.1 |
| CDY43651 | Canola | nucleus | 21.24 | 15.62 |
| CDY52525 | Canola | nucleus | 21.24 | 15.59 |
| CDY09551 | Canola | nucleus | 20.91 | 15.5 |
| CDY72268 | Canola | cytosol, plastid | 0.98 | 2.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GD59 | UniProt:A0A078GD59 | EnsemblPlants:CDY23304 | ProteinID:CDY23304 |
| ProteinID:CDY23304.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00021878001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF15 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EECB28 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : | : | : |
Description
BnaA08g12420DBnaA08g12420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GD59]
Coordinates
chrLK032142:-:361070..362744
Molecular Weight (calculated)
33549.8 Da
IEP (calculated)
10.291
GRAVY (calculated)
-0.602
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDLMRFPK IDDQAAIEEA ASQGLQSMEH LIRVLSNRPD KHNNVDCSEI TDYTVSKFKT VISLLNRTGH ARFRRGPVHS TAASPQKQQQ ISQPTRPAAV
101: VATPSRIVHS NQPSLTLDFT KPTIFGSKSS EISSCMSSGI TGDGSVSKGS SIFLTSAPSQ PVTSSGRPPL AAHPYRKKCL EHEHSLSGDF SGKISGSGCP
201: CKRRRKNRMK RTVRVPAISS KIADIPPDEY SWRKYGQKPI KGSPHPRGYY KCSTFRGCPA RKHVERALDD STMLIVTYEG EHRHNQSAMQ ENVSSSGVND
301: LVFASA
101: VATPSRIVHS NQPSLTLDFT KPTIFGSKSS EISSCMSSGI TGDGSVSKGS SIFLTSAPSQ PVTSSGRPPL AAHPYRKKCL EHEHSLSGDF SGKISGSGCP
201: CKRRRKNRMK RTVRVPAISS KIADIPPDEY SWRKYGQKPI KGSPHPRGYY KCSTFRGCPA RKHVERALDD STMLIVTYEG EHRHNQSAMQ ENVSSSGVND
301: LVFASA
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.