Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31550.1 | CDY57144 | AT3G56800.1 | 15733871 |
| AT4G31550.1 | CDY65072 | AT3G56800.1 | 15733871 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60852 | Canola | nucleus | 92.28 | 92.28 |
| Bra011282.1-P | Field mustard | nucleus | 95.3 | 88.2 |
| CDY23304 | Canola | nucleus | 81.54 | 79.41 |
| CDY13441 | Canola | nucleus | 74.5 | 75.77 |
| CDX72310 | Canola | nucleus | 72.15 | 75.7 |
| AT4G31550.1 | Thale cress | nucleus | 82.55 | 75.69 |
| CDY36432 | Canola | nucleus | 70.47 | 74.47 |
| CDY20325 | Canola | nucleus | 66.44 | 69.96 |
| CDY45583 | Canola | nucleus | 73.83 | 67.69 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 55.37 | 58.51 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 52.01 | 56.16 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 63.09 | 55.62 |
| VIT_11s0052g00450.t01 | Wine grape | nucleus | 45.3 | 55.1 |
| GSMUA_Achr10P... | Banana | nucleus | 49.33 | 55.06 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 46.64 | 54.51 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 50.67 | 53.74 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 47.32 | 53.41 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 53.36 | 53.36 |
| PGSC0003DMT400075531 | Potato | nucleus | 55.37 | 52.88 |
| KRH02746 | Soybean | nucleus | 56.04 | 52.19 |
| KRH19120 | Soybean | nucleus | 55.7 | 51.23 |
| Zm00001d002405_P001 | Maize | nucleus | 50.67 | 50.67 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 53.02 | 50.48 |
| Os04t0287400-01 | Rice | nucleus | 55.03 | 50.31 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 52.68 | 50.16 |
| Os04t0605100-01 | Rice | nucleus | 51.68 | 49.84 |
| EES11384 | Sorghum | nucleus | 52.35 | 49.52 |
| TraesCS2A01G270200.2 | Wheat | nucleus | 53.02 | 49.38 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 46.64 | 49.29 |
| Zm00001d026252_P001 | Maize | nucleus | 52.01 | 49.05 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 49.66 | 48.84 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 52.68 | 48.46 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 24.83 | 48.37 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 53.02 | 48.17 |
| PGSC0003DMT400024632 | Potato | nucleus | 53.36 | 47.6 |
| Zm00001d004086_P001 | Maize | nucleus | 52.68 | 47.43 |
| Solyc08g006320.2.1 | Tomato | nucleus | 52.01 | 47.26 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 39.93 | 46.3 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 45.64 | 45.95 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 45.97 | 45.82 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 45.64 | 45.33 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 44.63 | 45.08 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 44.97 | 44.97 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 44.3 | 44.3 |
| Solyc12g096350.1.1 | Tomato | nucleus | 49.33 | 43.49 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 39.93 | 43.27 |
| HORVU5Hr1G092770.2 | Barley | mitochondrion | 43.29 | 43.14 |
| Os08t0235800-00 | Rice | nucleus | 47.65 | 41.28 |
| EES14755 | Sorghum | nucleus | 43.96 | 41.2 |
| Os02t0462800-01 | Rice | nucleus | 34.9 | 41.11 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 41.28 | 40.73 |
| Zm00001d024376_P001 | Maize | nucleus | 42.28 | 40.51 |
| Zm00001d050195_P001 | Maize | nucleus | 41.28 | 40.2 |
| CDY38936 | Canola | nucleus | 40.27 | 39.47 |
| OQU84894 | Sorghum | nucleus | 39.26 | 39.13 |
| CDX89558 | Canola | nucleus | 38.93 | 38.93 |
| CDY03470 | Canola | nucleus | 42.62 | 37.57 |
| HORVU5Hr1G122800.4 | Barley | plastid | 31.88 | 36.82 |
| CDY50747 | Canola | nucleus | 36.91 | 36.3 |
| CDY40667 | Canola | nucleus | 37.92 | 35.53 |
| CDX74175 | Canola | nucleus | 38.26 | 35.51 |
| Zm00001d016457_P001 | Maize | nucleus | 38.59 | 35.38 |
| CDX92626 | Canola | nucleus | 41.28 | 35.34 |
| CDY41890 | Canola | nucleus | 36.91 | 35.14 |
| CDY10996 | Canola | nucleus | 40.6 | 34.87 |
| HORVU5Hr1G052630.2 | Barley | plastid | 27.18 | 32.14 |
| CDY05601 | Canola | nucleus | 36.24 | 32.05 |
| CDY33884 | Canola | nucleus | 36.24 | 32.05 |
| CDY48658 | Canola | nucleus | 36.24 | 32.05 |
| CDX86205 | Canola | nucleus | 36.58 | 31.96 |
| CDY29658 | Canola | nucleus | 34.23 | 31.68 |
| CDY34269 | Canola | nucleus | 42.28 | 31.42 |
| CDY47130 | Canola | nucleus | 35.91 | 31.2 |
| CDY10749 | Canola | nucleus | 34.9 | 31.14 |
| CDX97806 | Canola | nucleus | 34.23 | 30.91 |
| CDX84824 | Canola | nucleus | 34.9 | 30.77 |
| CDY23988 | Canola | nucleus | 34.56 | 30.29 |
| CDX71933 | Canola | nucleus | 18.12 | 27.14 |
| HORVU3Hr1G039500.1 | Barley | plastid | 28.86 | 27.13 |
| HORVU3Hr1G097420.1 | Barley | nucleus | 28.86 | 26.96 |
| CDX90180 | Canola | nucleus | 18.79 | 21.46 |
| CDY07185 | Canola | nucleus | 20.81 | 21.23 |
| CDY69417 | Canola | nucleus | 16.44 | 21.21 |
| CDX99806 | Canola | nucleus | 18.46 | 21.07 |
| CDY10943 | Canola | nucleus | 21.14 | 21.07 |
| CDY48511 | Canola | nucleus | 20.81 | 20.81 |
| CDY01962 | Canola | nucleus | 20.13 | 20.62 |
| CDY50779 | Canola | nucleus | 18.12 | 20.61 |
| CDX94201 | Canola | nucleus | 20.47 | 20.4 |
| CDY49246 | Canola | nucleus | 18.46 | 20.3 |
| CDX76334 | Canola | nucleus | 20.47 | 19.81 |
| CDY41375 | Canola | nucleus | 20.47 | 19.81 |
| CDX89000 | Canola | nucleus | 18.46 | 19.71 |
| CDY00583 | Canola | nucleus | 18.46 | 19.71 |
| CDY59336 | Canola | nucleus | 19.46 | 19.59 |
| CDY44115 | Canola | nucleus | 19.13 | 19.26 |
| CDY27045 | Canola | nucleus | 21.48 | 18.6 |
| CDX96157 | Canola | nucleus | 21.14 | 18.1 |
| CDY52525 | Canola | nucleus | 23.83 | 17.03 |
| CDX77581 | Canola | nucleus | 21.48 | 16.93 |
| CDX98217 | Canola | nucleus | 21.48 | 16.62 |
| CDY43651 | Canola | nucleus | 22.82 | 16.35 |
| CDY09551 | Canola | nucleus | 22.48 | 16.22 |
| CDY72268 | Canola | cytosol, plastid | 1.01 | 2.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078C0S5 | EnsemblPlants:CDX68763 | ProteinID:CDX68763 | ProteinID:CDX68763.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00130462001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF15 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE4696 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : | : | : |
Description
BnaC01g06900D
Coordinates
chrLK031789:-:1126557..1128147
Molecular Weight (calculated)
32757.9 Da
IEP (calculated)
10.350
GRAVY (calculated)
-0.646
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDLMRFPK MDDQKAIQEA ASQGLQSMEH LIRVLSTNRP EQHSNVDCSE ITDFTVSKFK TVISLLNRTG HARFRRGPDH STSSSPPIQQ TTTSLPPVVV
101: TPSRPSVTLD FTKPSIFGSN SKSSELDSSF MTSALTGDGS VSKGSSIFAP SQTVTSSGKP PLAGGHPYRK RCIEHEHSRD FSGKISGTGH GKCHCKKSRK
201: NRPKRTVRVP AISSKIADIP PDEFSWRKYG QKPIKGSPHP RGYYKCSTFR GCPARKHVER ALDDPAMLIV TYEGEHHHKQ SPMQMNVSGV NDLVFASA
101: TPSRPSVTLD FTKPSIFGSN SKSSELDSSF MTSALTGDGS VSKGSSIFAP SQTVTSSGKP PLAGGHPYRK RCIEHEHSRD FSGKISGTGH GKCHCKKSRK
201: NRPKRTVRVP AISSKIADIP PDEFSWRKYG QKPIKGSPHP RGYYKCSTFR GCPARKHVER ALDDPAMLIV TYEGEHHHKQ SPMQMNVSGV NDLVFASA
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.