Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G01250.1 | Thale cress | nucleus | 88.32 | 86.24 |
| CDY07185 | Canola | nucleus | 85.22 | 84.93 |
| CDY48511 | Canola | nucleus | 85.91 | 83.89 |
| KRH06582 | Soybean | nucleus | 50.17 | 43.58 |
| VIT_15s0046g02190.t01 | Wine grape | nucleus | 50.86 | 42.53 |
| KRH40377 | Soybean | nucleus | 50.86 | 42.53 |
| KRH00856 | Soybean | nucleus | 50.52 | 41.88 |
| PGSC0003DMT400000215 | Potato | nucleus | 47.77 | 39.49 |
| Solyc01g095100.2.1 | Tomato | nucleus | 48.11 | 39.44 |
| Solyc10g011910.2.1 | Tomato | nucleus | 40.89 | 38.26 |
| GSMUA_Achr10P... | Banana | nucleus | 39.52 | 37.7 |
| GSMUA_Achr10P... | Banana | nucleus | 38.49 | 37.33 |
| CDY69417 | Canola | nucleus | 26.12 | 32.9 |
| GSMUA_Achr8P19810_001 | Banana | nucleus | 39.52 | 32.86 |
| CDY27045 | Canola | nucleus | 38.14 | 32.27 |
| CDY59336 | Canola | nucleus | 32.65 | 32.09 |
| CDY44115 | Canola | nucleus | 32.65 | 32.09 |
| CDX96157 | Canola | nucleus | 38.14 | 31.9 |
| CDY10943 | Canola | nucleus | 32.3 | 31.44 |
| CDY41375 | Canola | nucleus | 32.99 | 31.17 |
| CDX76334 | Canola | nucleus | 32.99 | 31.17 |
| CDX94201 | Canola | nucleus | 31.96 | 31.1 |
| GSMUA_Achr7P14300_001 | Banana | nucleus | 32.99 | 30.87 |
| CDX71933 | Canola | nucleus | 20.62 | 30.15 |
| CDX90180 | Canola | nucleus | 23.02 | 25.67 |
| CDX99806 | Canola | nucleus | 22.34 | 24.9 |
| CDY50779 | Canola | nucleus | 21.99 | 24.43 |
| CDX89000 | Canola | nucleus | 23.02 | 24.01 |
| CDY00583 | Canola | nucleus | 23.02 | 24.01 |
| CDY49246 | Canola | nucleus | 22.34 | 23.99 |
| CDY72268 | Canola | cytosol, plastid | 8.25 | 23.3 |
| GSMUA_Achr10P... | Banana | plastid | 34.36 | 22.27 |
| CDY52525 | Canola | nucleus | 31.62 | 22.06 |
| CDX77581 | Canola | nucleus | 28.52 | 21.96 |
| CDX98217 | Canola | nucleus | 28.52 | 21.56 |
| CDY09551 | Canola | nucleus | 29.9 | 21.07 |
| CDY43651 | Canola | nucleus | 29.9 | 20.91 |
| CDY20325 | Canola | nucleus | 20.27 | 20.85 |
| CDY60852 | Canola | nucleus | 21.31 | 20.81 |
| CDX72310 | Canola | nucleus | 20.27 | 20.77 |
| CDY36432 | Canola | nucleus | 19.93 | 20.57 |
| CDY13441 | Canola | nucleus | 20.27 | 20.14 |
| CDX68763 | Canola | nucleus | 20.62 | 20.13 |
| CDY23304 | Canola | nucleus | 20.62 | 19.61 |
| CDY50747 | Canola | nucleus | 19.59 | 18.81 |
| CDY45583 | Canola | nucleus | 20.96 | 18.77 |
| CDY40667 | Canola | nucleus | 19.93 | 18.24 |
| CDY41890 | Canola | nucleus | 19.59 | 18.21 |
| CDY29658 | Canola | nucleus | 19.93 | 18.01 |
| CDX74175 | Canola | nucleus | 19.59 | 17.76 |
| CDY03470 | Canola | nucleus | 20.62 | 17.75 |
| CDX97806 | Canola | nucleus | 19.93 | 17.58 |
| CDX84824 | Canola | nucleus | 20.27 | 17.46 |
| CDX89558 | Canola | nucleus | 17.87 | 17.45 |
| CDY38936 | Canola | nucleus | 18.21 | 17.43 |
| CDY23988 | Canola | nucleus | 20.27 | 17.35 |
| CDY10996 | Canola | nucleus | 20.62 | 17.29 |
| CDX92626 | Canola | nucleus | 20.62 | 17.24 |
| CDY10749 | Canola | nucleus | 19.59 | 17.07 |
| CDY47130 | Canola | nucleus | 19.59 | 16.62 |
| CDY33884 | Canola | nucleus | 19.24 | 16.62 |
| CDY48658 | Canola | nucleus | 18.9 | 16.32 |
| CDY05601 | Canola | nucleus | 18.9 | 16.32 |
| CDX86205 | Canola | nucleus | 18.9 | 16.13 |
| CDY34269 | Canola | nucleus | 20.62 | 14.96 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078ELD4 | EnsemblPlants:CDY01962 | ProteinID:CDY01962 | ProteinID:CDY01962.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00113252001 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF35 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE4F6F | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
BnaC02g27650D
Coordinates
chrLK031930:-:833678..834908
Molecular Weight (calculated)
31691.3 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.551
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDWDLHAV VRGCSAVSSS ATTVFSGAVS SHTNPMFTYE EQSKAVLFRD IQDFYTPFTQ ESNVSSFSCL NYPEEPRQRQ NQKRPLSLSA SSGSVTSKPT
101: GSNTSRSKRR KIQHKKVCHV AAEALNSDVW AWRKYGQKPI KGSPYPRGYY RCSTSKGCLA RKQVERNRSD ATIFIVTYTA EHNHPAPTHR NSLAGSTRQK
201: SSDHPTTTIA TYSSSPVTST DEFVLPAEDL AVGDLDGDED LLSLSDTVVS EDFFEGLEEF AGGDSFSGNS SPASFDLSWV VNSGAAISGG I
101: GSNTSRSKRR KIQHKKVCHV AAEALNSDVW AWRKYGQKPI KGSPYPRGYY RCSTSKGCLA RKQVERNRSD ATIFIVTYTA EHNHPAPTHR NSLAGSTRQK
201: SSDHPTTTIA TYSSSPVTST DEFVLPAEDL AVGDLDGDED LLSLSDTVVS EDFFEGLEEF AGGDSFSGNS SPASFDLSWV VNSGAAISGG I
001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI
Arabidopsis Description
WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.