Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50779 | Canola | nucleus | 94.64 | 94.27 |
| AT1G29280.1 | Thale cress | nucleus | 87.74 | 88.42 |
| CDX90180 | Canola | nucleus | 86.59 | 86.59 |
| PGSC0003DMT400027378 | Potato | nucleus | 35.63 | 44.71 |
| PGSC0003DMT400052637 | Potato | nucleus | 42.15 | 42.97 |
| CDX71933 | Canola | nucleus | 31.8 | 41.71 |
| Solyc07g055280.2.1 | Tomato | nucleus | 41.76 | 39.64 |
| Solyc10g007970.1.1 | Tomato | nucleus | 38.31 | 39.22 |
| CDY00583 | Canola | nucleus | 41.0 | 38.35 |
| CDY49246 | Canola | nucleus | 39.46 | 38.01 |
| CDX89000 | Canola | nucleus | 40.61 | 37.99 |
| GSMUA_Achr8P27790_001 | Banana | nucleus | 34.48 | 37.19 |
| GSMUA_Achr7P24840_001 | Banana | nucleus | 35.25 | 37.1 |
| GSMUA_Achr3P15690_001 | Banana | nucleus | 35.63 | 36.61 |
| TraesCS3D01G289500.1 | Wheat | nucleus | 39.08 | 36.3 |
| HORVU3Hr1G071750.1 | Barley | nucleus | 39.08 | 36.3 |
| TraesCS3B01G324400.1 | Wheat | nucleus | 39.85 | 36.11 |
| GSMUA_Achr4P08360_001 | Banana | nucleus | 35.63 | 36.05 |
| TraesCS3A01G289700.2 | Wheat | nucleus | 38.7 | 35.19 |
| Zm00001d012746_P001 | Maize | nucleus | 34.87 | 32.85 |
| HORVU3Hr1G069320.3 | Barley | nucleus | 37.16 | 32.66 |
| CDY69417 | Canola | nucleus | 28.74 | 32.47 |
| TraesCS3B01G315600.1 | Wheat | cytosol | 36.78 | 32.32 |
| Os01t0750100-03 | Rice | nucleus | 39.08 | 32.28 |
| TraesCS3A01G281900.1 | Wheat | nucleus | 36.78 | 32.21 |
| TraesCS3D01G281900.1 | Wheat | nucleus, plastid | 36.78 | 32.21 |
| Zm00001d043569_P001 | Maize | cytosol | 34.87 | 31.71 |
| Zm00001d043474_P001 | Maize | nucleus | 37.16 | 31.7 |
| EES03563 | Sorghum | plastid | 37.93 | 31.03 |
| GSMUA_Achr4P15540_001 | Banana | nucleus | 33.72 | 30.77 |
| Os01t0730700-01 | Rice | nucleus | 37.55 | 30.72 |
| EES03611 | Sorghum | nucleus | 36.4 | 30.65 |
| CDY01962 | Canola | nucleus | 24.9 | 22.34 |
| CDY44115 | Canola | nucleus | 25.29 | 22.3 |
| CDY07185 | Canola | nucleus | 24.9 | 22.26 |
| CDY10943 | Canola | nucleus | 25.29 | 22.07 |
| CDY59336 | Canola | nucleus | 24.9 | 21.96 |
| CDY48511 | Canola | nucleus | 24.9 | 21.81 |
| CDY41375 | Canola | nucleus | 25.67 | 21.75 |
| CDX94201 | Canola | nucleus | 24.9 | 21.74 |
| CDX77581 | Canola | nucleus | 31.03 | 21.43 |
| CDX76334 | Canola | nucleus | 25.29 | 21.43 |
| CDX98217 | Canola | nucleus | 31.42 | 21.3 |
| CDY09551 | Canola | nucleus | 31.8 | 20.1 |
| CDY52525 | Canola | nucleus | 31.03 | 19.42 |
| CDY43651 | Canola | nucleus | 30.65 | 19.23 |
| CDY60852 | Canola | nucleus | 21.07 | 18.46 |
| CDX68763 | Canola | nucleus | 21.07 | 18.46 |
| CDY20325 | Canola | nucleus | 19.92 | 18.37 |
| CDY27045 | Canola | nucleus | 24.14 | 18.31 |
| CDX96157 | Canola | nucleus | 24.14 | 18.1 |
| CDY36432 | Canola | nucleus | 19.54 | 18.09 |
| CDX72310 | Canola | nucleus | 19.54 | 17.96 |
| CDX89558 | Canola | nucleus | 20.31 | 17.79 |
| CDY38936 | Canola | nucleus | 20.69 | 17.76 |
| CDY23304 | Canola | nucleus | 20.69 | 17.65 |
| CDY13441 | Canola | nucleus | 19.54 | 17.41 |
| CDY03470 | Canola | nucleus | 21.84 | 16.86 |
| CDY29658 | Canola | nucleus | 20.69 | 16.77 |
| CDY45583 | Canola | nucleus | 20.69 | 16.62 |
| CDY41890 | Canola | nucleus | 19.92 | 16.61 |
| CDX84824 | Canola | nucleus | 21.46 | 16.57 |
| CDY50747 | Canola | nucleus | 19.16 | 16.5 |
| CDY23988 | Canola | nucleus | 21.46 | 16.47 |
| CDY40667 | Canola | nucleus | 19.92 | 16.35 |
| CDX74175 | Canola | nucleus | 19.92 | 16.2 |
| CDX97806 | Canola | nucleus | 20.31 | 16.06 |
| CDY47130 | Canola | nucleus | 21.07 | 16.04 |
| CDY10749 | Canola | nucleus | 20.31 | 15.87 |
| CDY10996 | Canola | nucleus | 21.07 | 15.85 |
| CDX92626 | Canola | nucleus | 21.07 | 15.8 |
| CDX86205 | Canola | nucleus | 19.54 | 14.96 |
| CDY48658 | Canola | nucleus | 19.16 | 14.84 |
| CDY05601 | Canola | nucleus | 19.16 | 14.84 |
| CDY33884 | Canola | nucleus | 19.16 | 14.84 |
| CDY72268 | Canola | cytosol, plastid | 5.75 | 14.56 |
| CDY34269 | Canola | nucleus | 21.46 | 13.97 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078EFA4 | EnsemblPlants:CDX99806 | ProteinID:CDX99806 | ProteinID:CDX99806.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00108494001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF19 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDF276 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g22280D
Coordinates
chrLK031914:+:166919..167994
Molecular Weight (calculated)
29386.1 Da
IEP (calculated)
5.463
GRAVY (calculated)
-0.844
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGLDMARS YNDHESSQET GPESPNSLTF NATISSQSHK RSRRSIEKRV VNIPMKDIEG SRHKGDTTPP SDSWSWRKYG QKPIKGSPYP RGYYRCSSTK
101: GCPARKQVER SRDDPTMILI TYTSEHNHPW PLASSSRNGP KPKTEPKLEP EVLPEVEQEE EDDDNNKFMV LGREIQTTPS CVVDEFAWFS EMETTSSTIL
201: ESPIFSAEKK TAVSASADKV AVFFPMGEED ESLFADLGEL PECSAVFSHR SRVVGSQVEI F
101: GCPARKQVER SRDDPTMILI TYTSEHNHPW PLASSSRNGP KPKTEPKLEP EVLPEVEQEE EDDDNNKFMV LGREIQTTPS CVVDEFAWFS EMETTSSTIL
201: ESPIFSAEKK TAVSASADKV AVFFPMGEED ESLFADLGEL PECSAVFSHR SRVVGSQVEI F
001: MKRGLDMARS YNDHESSQET GPESPNSSTF NGMKALISSH SPKRSRRSVE KRVVNVPMKE MEGSRHKGDT TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
Arabidopsis Description
WRKY65WRKY65 [Source:UniProtKB/TrEMBL;Acc:A0A178W690]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.