Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G289500.1 | Wheat | nucleus | 94.77 | 96.8 |
| TraesCS3B01G324400.1 | Wheat | nucleus | 96.17 | 95.83 |
| HORVU3Hr1G071750.1 | Barley | nucleus | 93.03 | 95.02 |
| Zm00001d012746_P001 | Maize | nucleus | 65.51 | 67.87 |
| Os01t0750100-03 | Rice | nucleus | 72.13 | 65.51 |
| Zm00001d043474_P001 | Maize | nucleus | 69.34 | 65.03 |
| EES03611 | Sorghum | nucleus | 70.03 | 64.84 |
| PGSC0003DMT400027378 | Potato | nucleus | 30.66 | 42.31 |
| AT1G29280.1 | Thale cress | nucleus | 37.28 | 41.31 |
| CDX71933 | Canola | nucleus | 28.57 | 41.21 |
| Bra032300.1-P | Field mustard | nucleus | 36.93 | 40.46 |
| KRH59007 | Soybean | nucleus | 35.89 | 40.39 |
| TraesCS3A01G281900.1 | Wheat | nucleus | 41.46 | 39.93 |
| KRH27073 | Soybean | nucleus | 36.59 | 39.92 |
| CDX90180 | Canola | nucleus | 36.24 | 39.85 |
| Bra010839.1-P | Field mustard | nucleus | 36.24 | 39.85 |
| CDY50779 | Canola | nucleus | 36.24 | 39.69 |
| KRH42896 | Soybean | nucleus | 35.89 | 39.46 |
| PGSC0003DMT400052637 | Potato | nucleus | 35.19 | 39.45 |
| KRH22261 | Soybean | nucleus | 36.24 | 39.25 |
| CDX99806 | Canola | nucleus | 35.19 | 38.7 |
| VIT_10s0003g01600.t01 | Wine grape | nucleus | 36.93 | 38.13 |
| AT3G58710.1 | Thale cress | nucleus | 35.19 | 37.13 |
| Solyc10g007970.1.1 | Tomato | nucleus | 32.75 | 36.86 |
| CDY49246 | Canola | nucleus | 34.49 | 36.53 |
| Bra007413.1-P | Field mustard | nucleus | 34.15 | 36.3 |
| Solyc07g055280.2.1 | Tomato | nucleus | 34.49 | 36.0 |
| CDY00583 | Canola | nucleus | 34.49 | 35.48 |
| CDX89000 | Canola | nucleus | 34.49 | 35.48 |
| PGSC0003DMT400073267 | Potato | nucleus | 36.93 | 35.45 |
| Bra014556.1-P | Field mustard | nucleus | 34.15 | 35.25 |
| Solyc02g072190.2.1 | Tomato | nucleus | 36.59 | 34.09 |
| TraesCS1A01G197400.1 | Wheat | nucleus | 26.83 | 22.51 |
| TraesCS5A01G495800.1 | Wheat | nucleus | 23.0 | 22.37 |
| TraesCS3A01G229300.1 | Wheat | nucleus | 24.04 | 21.84 |
| TraesCS4A01G320800.2 | Wheat | nucleus | 25.78 | 20.05 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 19.51 | 18.98 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 19.16 | 18.46 |
| TraesCS7A01G343000.2 | Wheat | nucleus | 22.3 | 17.98 |
| TraesCS2A01G270200.2 | Wheat | nucleus | 19.51 | 17.5 |
| TraesCS2A01G443800.1 | Wheat | nucleus | 30.31 | 17.09 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 19.51 | 17.07 |
| TraesCS6A01G267500.1 | Wheat | nucleus | 27.53 | 16.42 |
| TraesCS4A01G246000.2 | Wheat | nucleus | 19.16 | 15.76 |
| TraesCS5A01G059100.1 | Wheat | nucleus | 18.82 | 15.21 |
| TraesCS5A01G443600.1 | Wheat | nucleus | 19.86 | 12.72 |
| TraesCS5A01G381000.1 | Wheat | nucleus | 17.42 | 12.59 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF19 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3A01G289700 | EnsemblPlants:TraesCS3A01G289700.2 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:-:518642161..518643265
Molecular Weight (calculated)
31417.2 Da
IEP (calculated)
4.778
GRAVY (calculated)
-0.931
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDCSTGTDS PRADSVDEQP PADAESPGVG QSKRDHPSPS SPLPPPKRSR RSVEKRVVSV PIAECGERAK TNGEGPPPPD SWAWRKYGQK PIKGSPYPRG
101: YYRCSSSKGC PARKQVERSR ADPTVLLVTY SYDHNHPWPA PKTGCHPTKS SPRLVEPKPE PGTPVECQPE HGPEAPEHGP EAPEQEQEEE HEQKPVIGLA
201: DPAAITTVTA ATEEEESFDF GWFDQYPTWP RTALYVPAFD VAPPPEDWER ELQGEDALFA GLGELPECAI VFGRRRDLAL PATAPCS
101: YYRCSSSKGC PARKQVERSR ADPTVLLVTY SYDHNHPWPA PKTGCHPTKS SPRLVEPKPE PGTPVECQPE HGPEAPEHGP EAPEQEQEEE HEQKPVIGLA
201: DPAAITTVTA ATEEEESFDF GWFDQYPTWP RTALYVPAFD VAPPPEDWER ELQGEDALFA GLGELPECAI VFGRRRDLAL PATAPCS
001: MKRGLDMARS YNDHESSQET GPESPNSSTF NGMKALISSH SPKRSRRSVE KRVVNVPMKE MEGSRHKGDT TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF
Arabidopsis Description
WRKY65WRKY65 [Source:UniProtKB/TrEMBL;Acc:A0A178W690]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.