Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G23320.1 | CDY57144 | AT3G56800.1 | 15733871 |
| AT2G23320.1 | CDY65072 | AT3G56800.1 | 15733871 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032174.1-P | Field mustard | nucleus | 99.34 | 94.67 |
| CDX89558 | Canola | nucleus | 90.79 | 92.62 |
| AT2G23320.1 | Thale cress | nucleus | 87.17 | 83.6 |
| KRH77042 | Soybean | nucleus | 53.95 | 51.09 |
| KRH28430 | Soybean | nucleus | 53.29 | 50.47 |
| PGSC0003DMT400064256 | Potato | nucleus | 52.96 | 49.69 |
| Solyc02g093050.2.1 | Tomato | nucleus | 52.63 | 49.08 |
| VIT_07s0031g00080.t01 | Wine grape | nucleus | 53.29 | 48.21 |
| KRH57965 | Soybean | nucleus | 52.63 | 47.9 |
| KRH04545 | Soybean | nucleus | 52.3 | 47.89 |
| PGSC0003DMT400065506 | Potato | nucleus | 49.67 | 45.21 |
| CDX72310 | Canola | nucleus | 39.47 | 42.25 |
| CDY20325 | Canola | nucleus | 38.82 | 41.7 |
| CDY36432 | Canola | nucleus | 38.49 | 41.49 |
| CDY13441 | Canola | nucleus | 39.8 | 41.3 |
| CDY60852 | Canola | nucleus | 40.46 | 41.28 |
| CDX68763 | Canola | nucleus | 39.47 | 40.27 |
| CDY23304 | Canola | nucleus | 40.46 | 40.2 |
| CDY03470 | Canola | nucleus | 44.08 | 39.65 |
| CDX92626 | Canola | nucleus | 43.42 | 37.93 |
| CDY10996 | Canola | nucleus | 43.09 | 37.75 |
| CDY45583 | Canola | nucleus | 39.8 | 37.23 |
| CDY40667 | Canola | nucleus | 38.16 | 36.48 |
| CDX74175 | Canola | nucleus | 38.16 | 36.14 |
| CDY41890 | Canola | nucleus | 36.51 | 35.46 |
| CDY50747 | Canola | nucleus | 35.2 | 35.31 |
| CDY34269 | Canola | nucleus | 43.42 | 32.92 |
| CDY29658 | Canola | nucleus | 33.88 | 31.99 |
| CDY23988 | Canola | nucleus | 35.53 | 31.76 |
| CDX84824 | Canola | nucleus | 34.87 | 31.36 |
| CDX97806 | Canola | nucleus | 33.55 | 30.91 |
| CDY48658 | Canola | nucleus | 34.21 | 30.86 |
| CDX86205 | Canola | nucleus | 34.54 | 30.79 |
| CDY47130 | Canola | nucleus | 34.54 | 30.61 |
| CDY10749 | Canola | nucleus | 33.55 | 30.54 |
| CDY05601 | Canola | nucleus | 33.55 | 30.27 |
| CDY33884 | Canola | nucleus | 33.55 | 30.27 |
| CDX71933 | Canola | nucleus | 16.78 | 25.63 |
| CDY69417 | Canola | nucleus | 16.12 | 21.21 |
| CDX90180 | Canola | nucleus | 18.09 | 21.07 |
| CDX99806 | Canola | nucleus | 17.76 | 20.69 |
| CDY50779 | Canola | nucleus | 17.43 | 20.23 |
| CDY49246 | Canola | nucleus | 16.78 | 18.82 |
| CDY07185 | Canola | nucleus | 17.76 | 18.49 |
| CDY01962 | Canola | nucleus | 17.43 | 18.21 |
| CDY48511 | Canola | nucleus | 17.76 | 18.12 |
| CDY10943 | Canola | nucleus | 17.76 | 18.06 |
| CDX94201 | Canola | nucleus | 17.76 | 18.06 |
| CDY00583 | Canola | nucleus | 16.12 | 17.56 |
| CDX89000 | Canola | nucleus | 16.12 | 17.56 |
| CDX76334 | Canola | nucleus | 17.43 | 17.21 |
| CDY41375 | Canola | nucleus | 17.43 | 17.21 |
| CDY59336 | Canola | nucleus | 16.45 | 16.89 |
| CDX77581 | Canola | nucleus | 20.39 | 16.4 |
| CDX98217 | Canola | nucleus | 20.39 | 16.1 |
| CDY44115 | Canola | nucleus | 15.46 | 15.88 |
| CDY52525 | Canola | nucleus | 21.71 | 15.83 |
| CDY27045 | Canola | nucleus | 16.78 | 14.83 |
| CDX96157 | Canola | nucleus | 16.78 | 14.66 |
| CDY09551 | Canola | nucleus | 19.41 | 14.29 |
| CDY43651 | Canola | nucleus | 19.41 | 14.18 |
| CDY72268 | Canola | cytosol, plastid | 1.64 | 4.85 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078HMV4 | UniProt:A0A078HMV4 | EnsemblPlants:CDY38936 | ProteinID:CDY38936 |
| ProteinID:CDY38936.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00066984001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF70 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEF4F3 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : | : | : |
Description
BnaA04g13570DBnaA04g13570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMV4]
Coordinates
chrLK032435:+:160238..161365
Molecular Weight (calculated)
33013.1 Da
IEP (calculated)
10.241
GRAVY (calculated)
-0.496
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVELMTRNY ISGVGVDSLA VQEAAASGLK SMENFIGLMS HESFNSNQPS SSSSAAITDL ELARNTTADA AVSKFKRVIS LLDRTPTGHA RFRRAPVISP
101: IQEIKPTPFQ APPQIHKGSF SSPIKTIEFS SLSSVTAESE HMKHHHHLSS HHHRPSETAP FGTQSLSTTV SSFSKPTKRK CNSENHIAGK CASASSGRCH
201: CSKKRKIKQR RVIRVPAISA KMSDVPPDDY SWRKYGQKPI KGSPHPRGYY KCSSVRGCPA RKHVERAADD SSMLIVTYEG DHNHSLSAAD LAGAAVANLI
301: LESS
101: IQEIKPTPFQ APPQIHKGSF SSPIKTIEFS SLSSVTAESE HMKHHHHLSS HHHRPSETAP FGTQSLSTTV SSFSKPTKRK CNSENHIAGK CASASSGRCH
201: CSKKRKIKQR RVIRVPAISA KMSDVPPDDY SWRKYGQKPI KGSPHPRGYY KCSSVRGCPA RKHVERAADD SSMLIVTYEG DHNHSLSAAD LAGAAVANLI
301: LESS
001: MAVELMTRNY ISGVGADSFA VQEAAASGLK SIENFIGLMS RDSFNSDQPS SSSASASASA AADLESARNT TADAAVSKFK RVISLLDRTR TGHARFRRAP
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
101: VHVISPVLLQ EEPKTTPFQS PLPPPPQMIR KGSFSSSMKT IDFSSLSSVT TESDNQKKIH HHQRPSETAP FASQTQSLST TVSSFSKSTK RKCNSENLLT
201: GKCASASSSG RCHCSKKRKI KQRRIIRVPA ISAKMSDVPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA ADDSSMLIVT YEGDHNHSLS
301: AADLAGAAVA DLILESS
Arabidopsis Description
WRKY15Probable WRKY transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:O22176]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.