CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043569_P001	Maize	cytosol	79.62	88.5
Os01t0730700-01	Rice	nucleus	68.03	68.03
TraesCS3D01G281900.1	Wheat	nucleus, plastid	61.44	65.77
TraesCS3B01G315600.1	Wheat	cytosol	60.81	65.32
HORVU3Hr1G069320.3	Barley	nucleus	60.81	65.32
TraesCS3A01G281900.1	Wheat	nucleus	59.87	64.09
GSMUA_Achr7P24840_001	Banana	nucleus	34.8	44.76
GSMUA_Achr4P08360_001	Banana	nucleus	35.42	43.8
GSMUA_Achr4P15540_001	Banana	nucleus	36.68	40.91
EES03611	Sorghum	nucleus	38.56	39.68
GSMUA_Achr8P27790_001	Banana	nucleus	30.09	39.67
AT1G29280.1	Thale cress	nucleus	31.97	39.38
CDX90180	Canola	nucleus	31.97	39.08
Bra010839.1-P	Field mustard	nucleus	31.66	38.7
GSMUA_Achr3P15690_001	Banana	nucleus	30.72	38.58
PGSC0003DMT400027378	Potato	nucleus	24.76	37.98
CDX99806	Canola	nucleus	31.03	37.93
Bra032300.1-P	Field mustard	nucleus	31.03	37.79
KRH27073	Soybean	nucleus	30.72	37.26
CDY50779	Canola	nucleus	30.41	37.02
KRH22261	Soybean	nucleus	30.72	36.98
VIT_10s0003g01600.t01	Wine grape	nucleus	31.66	36.33
KRH59007	Soybean	nucleus	28.53	35.69
KRH42896	Soybean	nucleus	28.84	35.25
CDX71933	Canola	nucleus	21.94	35.18
PGSC0003DMT400052637	Potato	nucleus	27.59	34.38
Solyc10g007970.1.1	Tomato	nucleus	26.96	33.73
AT3G58710.1	Thale cress	nucleus	28.53	33.46
Bra007413.1-P	Field mustard	nucleus	28.21	33.33
CDY49246	Canola	nucleus	28.21	33.21
Bra014556.1-P	Field mustard	nucleus	28.53	32.73
CDY00583	Canola	nucleus	28.53	32.62
CDX89000	Canola	nucleus	28.53	32.62
Solyc07g055280.2.1	Tomato	nucleus	27.27	31.64
PGSC0003DMT400073267	Potato	nucleus	29.47	31.44
Solyc02g072190.2.1	Tomato	nucleus	29.47	30.52
KXG22622	Sorghum	nucleus	21.63	18.96
KXG37092	Sorghum	nucleus	23.2	18.88
EES04883	Sorghum	nucleus	21.94	18.67
EER89819	Sorghum	nucleus	19.75	18.0
EES03310	Sorghum	nucleus, plastid	22.57	17.43
OQU84894	Sorghum	nucleus	16.3	17.39
OQU92055	Sorghum	nucleus	23.2	17.33
EES11384	Sorghum	nucleus	15.99	16.19
EES14755	Sorghum	nucleus	15.99	16.04
KXG27029	Sorghum	nucleus	25.08	15.84
EER91209	Sorghum	nucleus	16.93	15.34
EES07413	Sorghum	nucleus	23.82	15.29
EES17321	Sorghum	nucleus	17.55	15.09
EER93478	Sorghum	nucleus	15.36	12.07
KXG37354	Sorghum	nucleus	16.3	11.98

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8062129	UniProt:C5XJ23	EnsemblPlants:EES03563	ProteinID:EES03563
ProteinID:EES03563.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF9
SMART:SM00774	EnsemblPlantsGene:SORBI_3003G285500	SUPFAM:SSF118290	unigene:Sbi.4559	UniParc:UPI0001A84E5C	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_002458443.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:61880213..61882652

Molecular Weight (calculated)

32241.1 Da

IEP (calculated)

5.046

GRAVY (calculated)

-0.358

Length

319 amino acids

Sequence
(BLAST)

001: MDAEWSDGAA AASPPTVSGG ESKPGAAGAV SSSADCPGSP PVSPAPPSTT SPAAAAAAAG SGRRRSANKR VVTVPLADVS GPRPKGVGEG NTPTDSWAWR
101: KYGQKPIKGS PFPRAYYRCS SSKGCPARKQ VERSRAEPDK VIVTYSFEHS HSDAVARAQQ NRQQASKPKA VQRQPVPPEP AAESPSSGSY DVAAATVCGA
201: GAPAAAAAGT EVGGAASVEV RDEFRWLYDG VSVTSSASPS DVEAADEMLY GAMFFGAAAA PPAAPLPDEF VGDVGGLFDY GEGGGEEDAM FAGLGELPEC
301: AMVFRRHAGD GLSVAGGVK

Best Arabidopsis Sequence Match ( AT1G29280.1 )
(BLAST)

001: MKRGLDMARS YNDHESSQET GPESPNSSTF NGMKALISSH SPKRSRRSVE KRVVNVPMKE MEGSRHKGDT TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS
101: STKGCPARKQ VERSRDDPTM ILITYTSEHN HPWPLTSSTR NGPKPKPEPK PEPEPEVEPE AEEEDNKFMV LGRGIETTPS CVDEFAWFTE METTSSTILE
201: SPIFSSEKKT AVSGADDVAV FFPMGEEDES LFADLGELPE CSVVFRHRSS VVGSQVEIF

Arabidopsis Description

WRKY65WRKY65 [Source:UniProtKB/TrEMBL;Acc:A0A178W690]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.