CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030139_P001	Maize	nucleus	83.14	80.68
TraesCS1D01G200900.1	Wheat	nucleus	36.3	45.59
TraesCS1B01G212000.1	Wheat	nucleus	36.3	45.45
TraesCS1A01G197400.1	Wheat	nucleus	36.3	45.32
HORVU1Hr1G051260.3	Barley	nucleus	36.3	41.33
KXG27029	Sorghum	nucleus	36.3	30.69
KXG37092	Sorghum	nucleus	27.17	29.59
EES07413	Sorghum	nucleus	33.02	28.37
EES04883	Sorghum	nucleus	24.82	28.27
EES03611	Sorghum	nucleus	18.03	24.84
KXG22622	Sorghum	nucleus	20.84	24.45
EER89819	Sorghum	nucleus	19.2	23.43
EES03563	Sorghum	plastid	17.33	23.2
EES14755	Sorghum	nucleus	16.16	21.7
EES03310	Sorghum	nucleus, plastid	20.61	21.31
EES11384	Sorghum	nucleus	15.22	20.63
OQU84894	Sorghum	nucleus	14.05	20.07
EER91209	Sorghum	nucleus	13.58	16.48
EES17321	Sorghum	nucleus	13.58	15.63
EER93478	Sorghum	nucleus	14.52	15.27
KXG37354	Sorghum	nucleus	14.05	13.82

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8086285	UniProt:C5WQM8	ProteinID:EER94422.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
EnsemblPlants:OQU92055	ProteinID:OQU92055	ProteinID:OQU92055.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096
PANTHER:PTHR32096:SF49	SMART:SM00774	EnsemblPlantsGene:SORBI_3001G282400	SUPFAM:SSF118290	UniParc:UPI0001A82E3F	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_002467424.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:55413211..55415329

Molecular Weight (calculated)

46315.8 Da

IEP (calculated)

6.450

GRAVY (calculated)

-0.599

Length

427 amino acids

Sequence
(BLAST)

001: MCDFFWLSPA DQAGDLSDVV RASLQPPPPP PHHHRLPPPE EEEGLLLLQA RVNFDGDDHD EARSQQLVHG NGSMRLMLGS NGSGGCACDH AAALCPQHHP
101: EAERLIPQPP MSGPQPQLCA ASSFVVERDD DDAPVLEEHV LDMATAPHPH PHTSAIKRRK SQTKKVVCIP APVAAPPPGV GGRPSTSGEV VPSDLWAWRK
201: YGQKPIKGSP YPRGYYRCSS SKGCSARKQV ERSRTDPSML VITYTSDHNH PWPTQRNALA GSTRPAFSSS SAARSHHHHH HHHHSAAAVP DTTLAHRHAS
301: NVAVADNATP GWSIISASVH HQLLKQEVVD VDNHPISKQP AQDAAADRDC LDMFADMDGA LDVLCASNFH PKKQQQQVTA AQHLEKLPEE EDEHLLLGPD
401: PFSFSFLDWV GASFGVGETA ADNGDHS

Best Arabidopsis Sequence Match ( AT2G34830.2 )
(BLAST)

001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.