Factsheet for Zm00001d030139_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92055	Sorghum	nucleus	80.68	83.14
TraesCS1A01G197400.1	Wheat	nucleus	34.55	44.44
TraesCS1D01G200900.1	Wheat	nucleus	34.32	44.41
TraesCS1B01G212000.1	Wheat	nucleus	34.32	44.28
HORVU1Hr1G051260.3	Barley	nucleus	34.32	40.27
Zm00001d002452_P001	Maize	nucleus	34.77	30.3
Zm00001d037054_P001	Maize	nucleus	17.27	30.28
Zm00001d051550_P001	Maize	nucleus	31.82	30.04
Zm00001d017712_P001	Maize	nucleus	31.82	28.93
Zm00001d034888_P001	Maize	nucleus	24.32	28.16
Zm00001d053369_P001	Maize	nucleus	22.95	27.37
Zm00001d016052_P001	Maize	nucleus	23.41	26.89
Zm00001d012746_P001	Maize	nucleus	16.82	26.71
Zm00001d044171_P001	Maize	nucleus	20.91	26.67
Zm00001d008578_P001	Maize	nucleus	20.45	26.39
Zm00001d026218_P001	Maize	nucleus	25.91	26.09
Zm00001d043569_P001	Maize	cytosol	16.82	25.78
Zm00001d043474_P001	Maize	nucleus	17.73	25.49
Zm00001d011403_P001	Maize	nucleus	20.0	25.21
Zm00001d009698_P001	Maize	nucleus	19.32	24.5
Zm00001d024376_P001	Maize	nucleus	16.14	22.83
Zm00001d002405_P001	Maize	nucleus	15.23	22.48
Zm00001d050195_P001	Maize	nucleus	14.77	21.24
Zm00001d026252_P001	Maize	nucleus	15.0	20.89
Zm00001d004086_P001	Maize	nucleus	14.09	18.73
Zm00001d016457_P001	Maize	nucleus	13.64	18.46
Zm00001d033291_P007	Maize	nucleus	13.18	16.38
Zm00001d041397_P001	Maize	nucleus	13.18	15.8
Zm00001d033965_P001	Maize	nucleus	14.09	15.62
Zm00001d013307_P003	Maize	nucleus	13.86	15.44
Zm00001d030969_P001	Maize	nucleus	12.73	14.97
Zm00001d013709_P003	Maize	nucleus	12.5	14.91
Zm00001d034475_P001	Maize	cytosol	2.27	3.08

Protein Annotations

EntrezGene:103637745	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6KA86	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	ProteinID:ONM00389.1
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000220E2FC	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d030139	EnsemblPlants:Zm00001d030139_P001	EnsemblPlants:Zm00001d030139_T001
SEG:seg	:	:	:	:	:

Description

WRKY-transcription factor 60Probable WRKY transcription factor 14

Coordinates

chr1:+:108483337..108484748

Molecular Weight (calculated)

47189.9 Da

IEP (calculated)

6.660

GRAVY (calculated)

-0.566

Length

440 amino acids

Sequence
(BLAST)

001: MCDFFWLSPA DLGDLSDVVR ESLQPPPPHH HRLPAATPAS SAICSSGSHH LPEEEALLLL QARLNFGGDD HDEARSQLQS QQQLVHSSSG MVELMLGSNG
101: SGGCACDHAA ALCPHHHPEA EELIPRPTSG PQQQLCASTR SSFVERRDDD APVLQEHVLD MAMAPHRPHS SAVKRRKSQT KKVVCIPAPV AAPPGVGGRP
201: STSGEVVPSD LWAWRKYGQK PIKGSPYPRG YYRCSSSKAC SARKQVERSR TDPSMLVVTY TSDHNHPWPT QRNALAGSTR PASSSSSSAR GHHGHNHRHH
301: PSAAAVPDTA PAAHRHASNV AVADNATTPG SIISASVHRQ LLKQEVVDMD NSKPAEDAAA DHDLGFGMFA DMDGALDVLC APDFHPKKQQ QQATAQQLEK
401: LPEEEGTQLL LGPDPFSFGF LDWVGASFGV GERAADDGGQ

Best Arabidopsis Sequence Match ( AT2G34830.2 )
(BLAST)

001: MCSVFEFQDM DNFQGDLTDV VRGIGSGHVS PSPGPPEGPS PSSMSPPPTS DLHVEFPSAA TSASCLANPF GDPFVSMKDP LIHLPASYIS GAGDNKSNKS
101: FAIFPKIFED DHIKSQCSVF PRIKISQSNN IHDASTCNSP AITVSSAAVA ASPWGMINVN TTNSPRNCLL VDNNNNTSSC SQVQISSSPR NLGIKRRKSQ
201: AKKVVCIPAP AAMNSRSSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSSSSS
301: SLNPSSKSST AAATTSPSSR VFQNNSSKDE PNNSNLPSSS THPPFDAAAI KEENVEERQE KMEFDYNDVE NTYRPELLQE FQHQPEDFFA DLDELEGDSL
401: TMLLSHSSGG GNMENKTTIP DVFSDFFDDD ESSRSL

Arabidopsis Description

WRKY35WRKY DNA-binding protein 35 [Source:TAIR;Acc:AT2G34830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.