Factsheet for HORVU1Hr1G051260.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G200900.1	Wheat	nucleus	84.27	92.94
TraesCS1A01G197400.1	Wheat	nucleus	84.0	92.11
TraesCS1B01G212000.1	Wheat	nucleus	83.73	92.08
OQU92055	Sorghum	nucleus	41.33	36.3
Zm00001d030139_P001	Maize	nucleus	40.27	34.32
HORVU2Hr1G102740.3	Barley	nucleus	28.53	34.29
HORVU5Hr1G124320.1	Barley	nucleus	28.8	30.51
HORVU1Hr1G092360.1	Barley	nucleus	20.0	27.99
HORVU3Hr1G071750.1	Barley	nucleus	20.8	27.76
HORVU4Hr1G082550.2	Barley	nucleus	16.53	25.2
HORVU4Hr1G012580.5	Barley	nucleus, plastid	8.8	21.57
HORVU3Hr1G069320.3	Barley	nucleus	16.8	21.21
HORVU3Hr1G055910.5	Barley	plastid	24.0	20.36
HORVU6Hr1G067680.3	Barley	nucleus	30.13	20.14
HORVU7Hr1G080950.1	Barley	nucleus, plastid	21.33	19.66
HORVU5Hr1G015120.1	Barley	nucleus	14.93	18.54
HORVU5Hr1G092770.2	Barley	mitochondrion	14.67	18.39
HORVU5Hr1G094050.1	Barley	nucleus	15.47	14.68
HORVU4Hr1G011590.2	Barley	nucleus, plastid	16.0	14.56
HORVU5Hr1G052630.2	Barley	plastid	9.6	14.29
HORVU5Hr1G122800.4	Barley	plastid	9.6	13.95
HORVU5Hr1G106570.3	Barley	nucleus	15.73	11.99
HORVU3Hr1G039500.1	Barley	plastid	9.6	11.36
HORVU3Hr1G097420.1	Barley	nucleus	8.8	10.34

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287FJF1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU1Hr1G051260	EnsemblPlants:HORVU1Hr1G051260.3	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF49	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000B46B653	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:-:380276805..380278352

Molecular Weight (calculated)

40804.0 Da

IEP (calculated)

8.137

GRAVY (calculated)

-0.591

Length

375 amino acids

Sequence
(BLAST)

001: MCDLFWLSPG EQGDLSDVVR ASLHRPHQLP TPAADEEEEE YSSLLREGGS GGDGLVVGHG HGDEQLGMVA MMMGGNTRLP SSDHHVISLH SPPATTYTRP
101: HPEPLAGMIR RPGIGREGEM VVAPPPEIGE RLQHMSIVHH PRVPAAMKPR LTYSHPSDIA STRTDRRAPL RVKTCHNRCC VRACRKSQSK KVVCIPAPTA
201: APGASGRHST SGEVVPSDLW AWRKYGQKPI KGSPYPRGYY RCSSSKGCPA RKQVERSRTD PNMLVITYTS DHNHPWPTQR NALAGSTRPS SSSAARIAAS
301: SSSSSLAATA ARNSSNTNVD VDCAGVHHQL KQESDLDLFA DMDALNVFSS INKIQEDDSK QQLFDPFSSG FCDYI

Best Arabidopsis Sequence Match ( AT1G30650.1 )
(BLAST)

001: MCSVSELLDM ENFQGDLTDV VRGIGGHVLS PETPPSNIWP LPLSHPTPSP SDLNINPFGD PFVSMDDPLL QELNSITNSG YFSTVGDNNN NIHNNNGFLV
101: PKVFEEDHIK SQCSIFPRIR ISHSNIIHDS SPCNSPAMSA HVVAAAAAAS PRGIINVDTN SPRNCLLVDG TTFSSQIQIS SPRNLGLKRR KSQAKKVVCI
201: PAPAAMNSRS SGEVVPSDLW AWRKYGQKPI KGSPFPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPIQR NALAGSTRSS TSSSSNPNPS
301: KPSTANVNSS SIGSQNTIYL PSSTTPPPTL SSSAIKDERG DDMELENVDD DDDNQIAPYR PELHDHQHQP DDFFADLEEL EGDSLSMLLS HGCGGDGKDK
401: TTASDGISNF FGWSGDNNYN NYDDQDSRSL

Arabidopsis Description

WRKY14Probable WRKY transcription factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.