Factsheet for HORVU4Hr1G012580.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU1Hr1G040980.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	HORVU0Hr1G001280.1	AT3G56800.1	15733871
AT2G24570.1	HORVU2Hr1G016740.4	AT3G56800.1	15733871
AT2G24570.1	HORVU3Hr1G038010.1	AT3G56800.1	15733871
AT2G24570.1	HORVU3Hr1G079210.4	AT3G56800.1	15733871
AT2G24570.1	HORVU4Hr1G026290.3	AT3G56800.1	15733871
AT2G24570.1	HORVU5Hr1G014060.1	AT3G56800.1	15733871
AT2G24570.1	HORVU5Hr1G014070.2	AT3G56800.1	15733871
AT2G24570.1	HORVU5Hr1G044710.4	AT3G56800.1	15733871
AT2G24570.1	HORVU1Hr1G040980.1	AT5G28900.1	21798944
AT4G31550.1	HORVU0Hr1G001280.1	AT3G56800.1	15733871
AT4G31550.1	HORVU2Hr1G016740.4	AT3G56800.1	15733871
AT4G31550.1	HORVU3Hr1G038010.1	AT3G56800.1	15733871
AT4G31550.1	HORVU3Hr1G079210.4	AT3G56800.1	15733871
AT4G31550.1	HORVU4Hr1G026290.3	AT3G56800.1	15733871
AT4G31550.1	HORVU5Hr1G014060.1	AT3G56800.1	15733871
AT4G31550.1	HORVU5Hr1G014070.2	AT3G56800.1	15733871
AT4G31550.1	HORVU5Hr1G044710.4	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G052630.2	Barley	plastid	77.78	47.22
HORVU3Hr1G039500.1	Barley	plastid	97.39	47.0
HORVU5Hr1G122800.4	Barley	plastid	77.78	46.12
TraesCS2B01G454300.1	Wheat	nucleus	83.01	40.58
TraesCS2D01G431000.1	Wheat	nucleus	83.01	39.2
TraesCS2A01G433000.1	Wheat	nucleus	83.01	38.72
Zm00001d002405_P001	Maize	nucleus	73.2	37.58
EES11384	Sorghum	nucleus	76.47	37.14
Zm00001d026252_P001	Maize	nucleus	75.16	36.39
Os04t0605100-01	Rice	nucleus	71.9	35.6
HORVU5Hr1G092770.2	Barley	mitochondrion	56.86	29.1
KRH61946	Soybean	nucleus, plastid	52.94	29.03
HORVU5Hr1G015120.1	Barley	nucleus	52.94	26.82
KRH52606	Soybean	nucleus	51.63	26.33
KRH37367	Soybean	nucleus	49.67	25.68
KRH12362	Soybean	nucleus	49.02	25.6
CDX68763	Canola	nucleus	48.37	24.83
VIT_04s0069g00920.t01	Wine grape	nucleus	54.25	24.56
CDY60852	Canola	nucleus	47.71	24.5
AT2G24570.1	Thale cress	nucleus	50.98	24.3
CDY23304	Canola	nucleus	48.37	24.18
KRH16144	Soybean	nucleus	49.67	24.05
KRH04945	Soybean	nucleus	49.02	23.73
CDY20325	Canola	nucleus	43.79	23.67
AT4G31550.1	Thale cress	nucleus	49.67	23.38
Bra011282.1-P	Field mustard	nucleus	48.37	22.98
GSMUA_Achr6P03810_001	Banana	nucleus	38.56	22.96
CDX72310	Canola	nucleus	42.48	22.89
Bra023998.1-P	Field mustard	nucleus	49.02	22.87
CDY45583	Canola	nucleus	48.37	22.77
Bra010231.1-P	Field mustard	nucleus	49.02	22.59
CDY13441	Canola	nucleus	43.14	22.53
Bra032084.1-P	Field mustard	nucleus	47.71	22.46
Solyc08g006320.2.1	Tomato	nucleus	47.71	22.26
PGSC0003DMT400024632	Potato	nucleus	48.37	22.16
CDY36432	Canola	nucleus	39.22	21.28
PGSC0003DMT400075531	Potato	nucleus	41.83	20.51
HORVU3Hr1G097420.1	Barley	nucleus	38.56	18.5
Solyc12g096350.1.1	Tomato	nucleus	37.91	17.16
HORVU4Hr1G011590.2	Barley	nucleus, plastid	41.83	15.53
HORVU5Hr1G094050.1	Barley	nucleus	34.64	13.42
HORVU1Hr1G092360.1	Barley	nucleus	21.57	12.31
HORVU4Hr1G082550.2	Barley	nucleus	16.99	10.57
HORVU3Hr1G071750.1	Barley	nucleus	18.95	10.32
HORVU5Hr1G106570.3	Barley	nucleus	32.68	10.16
HORVU3Hr1G069320.3	Barley	nucleus	18.95	9.76
HORVU1Hr1G051260.3	Barley	nucleus	21.57	8.8
HORVU5Hr1G124320.1	Barley	nucleus	20.26	8.76
HORVU2Hr1G102740.3	Barley	nucleus	17.65	8.65
HORVU7Hr1G080950.1	Barley	nucleus, plastid	20.91	7.86
HORVU3Hr1G055910.5	Barley	plastid	20.91	7.24
HORVU6Hr1G067680.3	Barley	nucleus	19.61	5.35

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287N955	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU4Hr1G012580	EnsemblPlants:HORVU4Hr1G012580.5	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF32	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000B468E1A	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:41735624..41736326

Molecular Weight (calculated)

16312.3 Da

IEP (calculated)

10.975

GRAVY (calculated)

-0.709

Length

153 amino acids

Sequence
(BLAST)

001: MAAPVPQPQS LTLDFTKPNL TMSGATSVTS TSFFSSVTAA EGSVSKGRSL VSAGKPPLSG HKRKPYAGAH SEANTTGSRC HCSKRRKNRV KTTVRMPAVS
101: AKIADIPPDE YSWRKYGQKP IKGSPYPRSS EAQPMSGQQT SASFGGERNL WGP

Best Arabidopsis Sequence Match ( AT4G31550.1 )
(BLAST)

001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA

Arabidopsis Description

WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.