Factsheet for HORVU3Hr1G055910.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G227400.1	Wheat	nucleus	65.38	90.31
TraesCS3A01G229300.1	Wheat	nucleus	64.03	89.56
TraesCS3B01G255400.1	Wheat	nucleus	64.48	89.34
Os01t0624700-01	Rice	nucleus	48.19	61.21
Zm00001d044171_P001	Maize	nucleus	45.25	57.97
Zm00001d011403_P001	Maize	nucleus	42.31	53.58
EES03310	Sorghum	nucleus, plastid	50.0	53.51
HORVU1Hr1G092360.1	Barley	nucleus	31.9	52.61
HORVU4Hr1G082550.2	Barley	nucleus	24.66	44.31
GSMUA_Achr9P05460_001	Banana	nucleus	23.98	29.12
GSMUA_Achr5P09430_001	Banana	nucleus	22.4	29.12
GSMUA_Achr1P05010_001	Banana	nucleus	22.4	26.83
GSMUA_Achr6P31840_001	Banana	nucleus	22.85	26.23
HORVU1Hr1G051260.3	Barley	nucleus	20.36	24.0
HORVU3Hr1G071750.1	Barley	nucleus	15.16	23.84
HORVU2Hr1G102740.3	Barley	nucleus	16.52	23.4
HORVU5Hr1G124320.1	Barley	nucleus	17.65	22.03
CDY72268	Canola	cytosol, plastid	4.98	21.36
HORVU3Hr1G069320.3	Barley	nucleus	14.25	21.21
HORVU7Hr1G080950.1	Barley	nucleus, plastid	19.46	21.13
HORVU4Hr1G012580.5	Barley	nucleus, plastid	7.24	20.91
HORVU5Hr1G015120.1	Barley	nucleus	13.57	19.87
HORVU5Hr1G092770.2	Barley	mitochondrion	13.35	19.73
HORVU5Hr1G122800.4	Barley	plastid	9.5	16.28
HORVU5Hr1G094050.1	Barley	nucleus	13.12	14.68
HORVU5Hr1G052630.2	Barley	plastid	8.37	14.68
HORVU4Hr1G011590.2	Barley	nucleus, plastid	13.35	14.32
HORVU3Hr1G039500.1	Barley	plastid	9.73	13.56
HORVU6Hr1G067680.3	Barley	nucleus	17.19	13.55
HORVU3Hr1G097420.1	Barley	nucleus	8.37	11.6
HORVU5Hr1G106570.3	Barley	nucleus	12.44	11.18

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287L4P4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU3Hr1G055910	EnsemblPlants:HORVU3Hr1G055910.5	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF23	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000B482ECB	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:417326506..417333281

Molecular Weight (calculated)

47724.0 Da

IEP (calculated)

8.216

GRAVY (calculated)

-0.591

Length

442 amino acids

Sequence
(BLAST)

001: RSSPLLSPAL AAAKRAPCPP LAFDFTGIES SPSCHSSRSS WTTSNHPPRG QSPSVLPAYY ASTTPCSSGT GVRVYICPDR PASAQSQPYP APARTQPSSS
101: SSLPLDLARS LRQTSPSSNP CSPFMCGLLL RMEHLNDWDL QAVVRSCTTF SSHPQDRAGP SPSPAPVPET TVKREPRGDV LRPASAAKDA PSLYGLEYLD
201: LDHKPFLLSA PSPQSWAAVD DRHEMMISFP AAASTSGVRP RVPPGRKPGI RTTTPRPKRS KKSQLKKEVR EVPVADGGVS SDLWAWRKYG QKPIKGSPYP
301: RGYYKCSSMK GCMARKLVER SPAKPGVLVI TYMAEHCHPV PTQINALAGT TRHKSTPAED HVTTTTTSPK RHGNAHEPVR CEDESNETSS MAVDGTTEDA
401: AVDDGSDFWP TELDLDELLA PVDGDLDHVF DEDGALGRRL SL

Best Arabidopsis Sequence Match ( AT4G23550.1 )
(BLAST)

001: MGEVAYMDEG DLEAIVRGYS GSGDAFSGES SGTFSPSFCL PMETSSFYEP EMETSGLDEL GELYKPFYPF STQTILTSSV SLPEDSKPFR DDKKQRSHGC
101: LLSNGSRADH IRISESKSKK SKKNQQKRVV EQVKEENLLS DAWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVERN PQNPEKFTIT YTNEHNHELP
201: TRRNSLAGST RAKTSQPKPT LTKKSEKEVV SSPTSNPMIP SADESSVAVQ EMSVAETSTH QAAGAIEGRR LSNGLPSDLM SGSGTFPSFT GDFDELLNSQ
301: EFFSGYLWNY

Arabidopsis Description

WRKY29WRKY29 [Source:UniProtKB/TrEMBL;Acc:A0A178V2E9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.