Factsheet for HORVU4Hr1G011590.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04670.1	HORVU0Hr1G001280.1	AT3G56800.1	15733871
AT3G04670.1	HORVU2Hr1G016740.4	AT3G56800.1	15733871
AT3G04670.1	HORVU3Hr1G038010.1	AT3G56800.1	15733871
AT3G04670.1	HORVU3Hr1G079210.4	AT3G56800.1	15733871
AT3G04670.1	HORVU4Hr1G026290.3	AT3G56800.1	15733871
AT3G04670.1	HORVU5Hr1G014060.1	AT3G56800.1	15733871
AT3G04670.1	HORVU5Hr1G014070.2	AT3G56800.1	15733871
AT3G04670.1	HORVU5Hr1G044710.4	AT3G56800.1	15733871
AT5G28650.1	HORVU0Hr1G001280.1	AT3G56800.1	15733871
AT5G28650.1	HORVU2Hr1G016740.4	AT3G56800.1	15733871
AT5G28650.1	HORVU3Hr1G038010.1	AT3G56800.1	15733871
AT5G28650.1	HORVU3Hr1G079210.4	AT3G56800.1	15733871
AT5G28650.1	HORVU4Hr1G026290.3	AT3G56800.1	15733871
AT5G28650.1	HORVU5Hr1G014060.1	AT3G56800.1	15733871
AT5G28650.1	HORVU5Hr1G014070.2	AT3G56800.1	15733871
AT5G28650.1	HORVU5Hr1G044710.4	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G069500.2	Wheat	nucleus	79.37	96.18
TraesCS4D01G068200.1	Wheat	nucleus	79.13	95.6
TraesCS4A01G246000.2	Wheat	nucleus	79.61	93.98
EER91209	Sorghum	nucleus	70.87	82.95
Zm00001d033291_P007	Maize	nucleus	69.17	80.51
Zm00001d013709_P003	Maize	nucleus	67.23	75.07
HORVU3Hr1G097420.1	Barley	nucleus	46.36	59.87
GSMUA_Achr10P...	Banana	nucleus	42.72	58.28
VIT_07s0141g00680.t01	Wine grape	nucleus	44.42	53.82
KRH71315	Soybean	nucleus	45.87	53.24
Solyc09g066010.2.1	Tomato	nucleus	42.23	52.57
Bra040396.1-P	Field mustard	nucleus	38.11	51.82
CDY50747	Canola	nucleus	38.11	51.82
PGSC0003DMT400038986	Potato	nucleus	43.2	51.45
AT5G28650.1	Thale cress	nucleus	41.02	51.21
Bra001117.1-P	Field mustard	nucleus	39.32	50.78
CDX74175	Canola	nucleus	39.56	50.78
AT3G04670.1	Thale cress	nucleus	40.53	50.61
CDY48658	Canola	nucleus	41.02	50.15
Bra010005.1-P	Field mustard	nucleus	41.5	50.15
CDX86205	Canola	nucleus	41.5	50.15
CDY40667	Canola	nucleus	38.59	50.0
Bra020617.1-P	Field mustard	nucleus	40.78	49.85
CDY33884	Canola	nucleus	40.78	49.85
CDY41890	Canola	nucleus	37.86	49.84
CDY05601	Canola	nucleus	40.53	49.55
KRH67313	Soybean	nucleus	39.81	48.09
Solyc06g008610.2.1	Tomato	nucleus	40.53	47.99
KRH32116	Soybean	extracellular	45.15	47.45
PGSC0003DMT400013632	Potato	nucleus	40.53	47.04
HORVU4Hr1G012580.5	Barley	nucleus, plastid	15.53	41.83
HORVU5Hr1G094050.1	Barley	nucleus	38.84	40.51
HORVU5Hr1G092770.2	Barley	mitochondrion	22.82	31.44
HORVU5Hr1G122800.4	Barley	plastid	18.93	30.23
HORVU5Hr1G015120.1	Barley	nucleus	21.84	29.8
HORVU5Hr1G052630.2	Barley	plastid	17.48	28.57
HORVU5Hr1G106570.3	Barley	nucleus	29.37	24.59
HORVU3Hr1G039500.1	Barley	plastid	18.69	24.29
HORVU4Hr1G082550.2	Barley	nucleus	12.86	21.54
HORVU1Hr1G092360.1	Barley	nucleus	12.86	19.78
HORVU3Hr1G071750.1	Barley	nucleus	13.35	19.57
HORVU3Hr1G069320.3	Barley	nucleus	12.38	17.17
HORVU5Hr1G124320.1	Barley	nucleus	14.32	16.67
HORVU2Hr1G102740.3	Barley	nucleus	12.14	16.03
HORVU1Hr1G051260.3	Barley	nucleus	14.56	16.0
HORVU7Hr1G080950.1	Barley	nucleus, plastid	14.08	14.25
HORVU3Hr1G055910.5	Barley	plastid	14.32	13.35
HORVU6Hr1G067680.3	Barley	nucleus	12.62	9.27

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287N837	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU4Hr1G011590	EnsemblPlants:HORVU4Hr1G011590.2	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF23	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000B472396	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:36194588..36197584

Molecular Weight (calculated)

45495.2 Da

IEP (calculated)

10.687

GRAVY (calculated)

-0.741

Length

412 amino acids

Sequence
(BLAST)

001: EKQTTTENYS PVSPWLLPSH LPLNRSPLVR GGPIVVRRPS LPSPWPRVHR APPRDLPRRE LPSNRRAGEL LEMEEVEEAN RMAVESCHRV LGLLTQTQGP
101: EQLRSIALGT DEACAKFRKV VSLLGNEPSG GTTHPRAKVV SRRQTPGFLS QKGFLDNNTP VVVLNSAHPS TSSAQVYPRN SILDSQPAHP IGGPPKLVQP
201: LSAHFQFGDS SRYNQFQHQH QQQQQKMRAE MFKRSNSGIN LKFDSPSGTG TMSSARSFMS SLSMDGSVAS LDAKSSSFHL IGGPAMSDPV NAQQAPRRRC
301: SGRGEDGNGK CAATGRCHCS KRRKLRVKRT IKVPAISNKI ADIPPDEYSW RKYGQKPIKG SPHPRGYYKC SSVRGCPARK HVERCVDDPS MLIVTYEGEH
401: NHTRMPTQSA QA

Best Arabidopsis Sequence Match ( AT5G28650.1 )
(BLAST)

001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT

Arabidopsis Description

WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.