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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
  • nucleus 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G012580.5 Barley nucleus, plastid 46.12 77.78
HORVU5Hr1G052630.2 Barley plastid 56.59 57.94
TraesCS2B01G454300.1 Wheat nucleus 69.38 57.19
TraesCS2D01G431000.1 Wheat nucleus 71.71 57.1
TraesCS2A01G433000.1 Wheat nucleus 70.93 55.79
Zm00001d002405_P001 Maize nucleus 58.14 50.34
EES11384 Sorghum nucleus 60.85 49.84
HORVU3Hr1G039500.1 Barley plastid 60.08 48.9
Zm00001d026252_P001 Maize nucleus 58.91 48.1
Os04t0605100-01 Rice nucleus 57.36 47.9
HORVU5Hr1G015120.1 Barley nucleus 44.57 38.08
HORVU5Hr1G092770.2 Barley mitochondrion 43.8 37.79
KRH61946 Soybean nucleus, plastid 36.82 34.05
CDY20325 Canola nucleus 36.05 32.86
VIT_04s0069g00920.t01 Wine grape nucleus 43.02 32.84
KRH52606 Soybean nucleus 37.6 32.33
GSMUA_Achr6P03810_001 Banana nucleus 32.17 32.3
AT2G24570.1 Thale cress nucleus 39.92 32.09
CDY60852 Canola nucleus 36.82 31.88
CDX68763 Canola nucleus 36.82 31.88
CDY23304 Canola nucleus 37.6 31.7
KRH37367 Soybean nucleus 36.05 31.42
Bra023998.1-P Field mustard nucleus 39.92 31.4
KRH12362 Soybean nucleus 35.66 31.4
CDY13441 Canola nucleus 35.66 31.4
CDX72310 Canola nucleus 34.5 31.34
KRH16144 Soybean nucleus 38.37 31.33
PGSC0003DMT400024632 Potato nucleus 40.31 31.14
CDY45583 Canola nucleus 39.15 31.08
Solyc08g006320.2.1 Tomato nucleus 39.15 30.79
Bra032084.1-P Field mustard nucleus 38.37 30.46
PGSC0003DMT400075531 Potato nucleus 36.82 30.45
Bra011282.1-P Field mustard nucleus 37.98 30.43
KRH04945 Soybean nucleus 37.21 30.38
AT4G31550.1 Thale cress nucleus 37.98 30.15
Bra010231.1-P Field mustard nucleus 38.37 29.82
CDY36432 Canola nucleus 32.56 29.79
Solyc12g096350.1.1 Tomato nucleus 34.88 26.63
HORVU3Hr1G097420.1 Barley nucleus 31.01 25.08
HORVU4Hr1G011590.2 Barley nucleus, plastid 30.23 18.93
HORVU5Hr1G094050.1 Barley nucleus 27.52 17.97
HORVU5Hr1G106570.3 Barley nucleus 28.68 15.04
HORVU1Hr1G092360.1 Barley nucleus 14.34 13.81
HORVU4Hr1G082550.2 Barley nucleus 12.4 13.01
HORVU3Hr1G071750.1 Barley nucleus 12.79 11.74
HORVU5Hr1G124320.1 Barley nucleus 13.57 9.89
HORVU3Hr1G069320.3 Barley nucleus 11.24 9.76
HORVU1Hr1G051260.3 Barley nucleus 13.95 9.6
HORVU7Hr1G080950.1 Barley nucleus, plastid 15.12 9.58
HORVU3Hr1G055910.5 Barley plastid 16.28 9.5
HORVU2Hr1G102740.3 Barley nucleus 9.69 8.01
HORVU6Hr1G067680.3 Barley nucleus 10.08 4.63
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80UniProt:A0A287T0F2GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0043565EnsemblPlantsGene:HORVU5Hr1G122800EnsemblPlants:HORVU5Hr1G122800.4InterPro:IPR003657
InterPro:IPR036576PFAM:PF03106PFAM:PF10533PFscan:PS50811PANTHER:PTHR31282PANTHER:PTHR31282:SF32
SUPFAM:SSF118290UniParc:UPI000B4845DBInterPro:WRKY_domInterPro:WRKY_dom_sfInterPro:Zn-cluster-domSEG:seg
Description
No Description!
Coordinates
chrchr5H:-:662774254..662775321
Molecular Weight (calculated)
27518.1 Da
IEP (calculated)
11.482
GRAVY (calculated)
-0.590
Length
258 amino acids
Sequence
(BLAST)
001: KRKQPRPSPV PRHTSFVPVC PTSRSTCSPP PPQEASLPRC CSNNTGSCSA RSPTRPSPSS AADQAVSKFR KVISIPDRTG HARFRHGPIQ SPPPPPPLAL
101: VAPPPSPPRP LAIELSRPTP LTVVAPVSMA APVPQPQSLT LDFTKPNLTM SGAMSVTSTS FFSSITAAEG SVSKGRSLVS AGKPPLSGHK RKPCTGAHSE
201: ANTTGSRCYC SKIRKNRMKT TVRVPRVSAK IADIPPDEYS WRKYGQKPIK GSPYPRGH
Best Arabidopsis Sequence Match ( AT4G31550.3 )
(BLAST)
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKRKNRMKRT VRVPAISAKI ADIPPDEYSW RKYGQKPIKG SPHPR
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.