Factsheet for Bra032084.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003251.1-P
Bra006216.1-P
Bra007269.1-P
Bra008801.1-P
Bra014671.1-P
Bra036126.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	Bra003251.1-P	AT3G56800.1	15733871
AT2G24570.1	Bra007269.1-P	AT3G56800.1	15733871
AT2G24570.1	Bra014671.1-P	AT3G56800.1	15733871
AT2G24570.1	Bra006216.1-P	AT5G13810.1	21798944
AT2G24570.1	Bra008801.1-P	AT5G13810.1	21798944
AT2G24570.1	Bra036126.1-P	AT5G28900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45583	Canola	nucleus	96.62	96.62
CDY20325	Canola	nucleus	83.38	95.76
AT2G24570.1	Thale cress	nucleus	82.15	83.18
Bra011282.1-P	Field mustard	nucleus	70.77	71.43
Bra023998.1-P	Field mustard	nucleus	70.46	69.82
Bra010231.1-P	Field mustard	nucleus	71.08	69.58
GSMUA_Achr7P15930_001	Banana	nucleus	52.31	60.28
Bra013779.1-P	Field mustard	nucleus	25.85	58.74
VIT_04s0069g00920.t01	Wine grape	nucleus	60.62	58.28
GSMUA_Achr10P...	Banana	nucleus	47.69	58.05
GSMUA_Achr3P05670_001	Banana	nucleus	48.92	57.61
VIT_11s0052g00450.t01	Wine grape	nucleus	43.08	57.14
GSMUA_Achr5P21910_001	Banana	nucleus	44.62	56.86
PGSC0003DMT400075531	Potato	nucleus	54.15	56.41
GSMUA_Achr9P22950_001	Banana	nucleus	47.08	54.45
GSMUA_Achr5P04870_001	Banana	nucleus	49.85	54.36
KRH02746	Soybean	nucleus	51.69	52.5
GSMUA_Achr3P00510_001	Banana	nucleus	42.46	52.27
KRH19120	Soybean	nucleus	52.0	52.16
TraesCS2D01G269200.1	Wheat	nucleus	50.15	52.08
Os04t0605100-01	Rice	nucleus	48.62	51.13
TraesCS2A01G270200.2	Wheat	nucleus	50.15	50.94
Os04t0287400-01	Rice	nucleus	51.08	50.92
GSMUA_Achr4P20600_001	Banana	nucleus	44.0	50.71
GSMUA_Achr1P23560_001	Banana	nucleus	47.08	50.49
Zm00001d002405_P001	Maize	nucleus	46.15	50.34
TraesCS2B01G454300.1	Wheat	nucleus	48.31	50.16
Zm00001d026252_P001	Maize	nucleus	48.62	50.0
GSMUA_Achr6P03810_001	Banana	nucleus	39.38	49.81
Zm00001d004086_P001	Maize	nucleus	50.46	49.55
EES11384	Sorghum	nucleus	48.0	49.52
Solyc12g096350.1.1	Tomato	nucleus	51.08	49.11
TraesCS2D01G431000.1	Wheat	nucleus	48.62	48.77
PGSC0003DMT400024632	Potato	nucleus	49.85	48.5
TraesCS2A01G433000.1	Wheat	nucleus	48.92	48.48
Solyc08g006320.2.1	Tomato	nucleus	48.62	48.17
HORVU4Hr1G012580.5	Barley	nucleus, plastid	22.46	47.71
TraesCS5B01G375100.1	Wheat	nucleus	42.77	46.49
TraesCS5D01G382600.1	Wheat	nucleus	42.46	46.0
TraesCS5A01G060200.1	Wheat	nucleus	41.54	45.76
TraesCS5D01G071800.1	Wheat	nucleus	41.54	45.61
TraesCS5A01G373100.1	Wheat	nucleus	41.54	45.3
TraesCS5B01G067700.1	Wheat	nucleus	41.54	45.3
HORVU5Hr1G092770.2	Barley	mitochondrion	41.23	44.82
GSMUA_Achr3P27880_001	Banana	nucleus	37.85	44.73
Os08t0235800-00	Rice	nucleus	46.15	43.6
Zm00001d024376_P001	Maize	nucleus	40.62	42.44
Zm00001d050195_P001	Maize	nucleus	39.38	41.83
Os02t0462800-01	Rice	nucleus	32.31	41.5
HORVU5Hr1G015120.1	Barley	nucleus	38.46	41.39
EES14755	Sorghum	nucleus	39.69	40.57
OQU84894	Sorghum	nucleus	36.31	39.46
Bra040396.1-P	Field mustard	nucleus	36.0	38.61
HORVU5Hr1G122800.4	Barley	plastid	30.46	38.37
Bra032174.1-P	Field mustard	nucleus	37.54	38.24
Bra001117.1-P	Field mustard	nucleus	36.62	37.3
Bra019239.1-P	Field mustard	nucleus	38.77	36.21
Zm00001d016457_P001	Maize	nucleus	35.38	35.38
Bra021652.1-P	Field mustard	nucleus	33.54	33.96
Bra010005.1-P	Field mustard	nucleus	35.08	33.43
Bra020617.1-P	Field mustard	nucleus	34.46	33.23
Bra022808.1-P	Field mustard	nucleus	33.85	32.54
Bra018303.1-P	Field mustard	nucleus	33.23	32.24
HORVU5Hr1G052630.2	Barley	plastid	24.92	32.14
HORVU3Hr1G097420.1	Barley	nucleus	28.62	29.15
HORVU3Hr1G039500.1	Barley	plastid	26.15	26.81
Bra037368.1-P	Field mustard	nucleus	19.38	21.14
Bra010839.1-P	Field mustard	nucleus	16.92	21.07
Bra032300.1-P	Field mustard	nucleus	16.92	20.99
Bra007413.1-P	Field mustard	nucleus	16.62	20.0
Bra014556.1-P	Field mustard	nucleus	16.92	19.78
Bra019297.1-P	Field mustard	nucleus	17.85	19.4
Bra020814.1-P	Field mustard	nucleus	17.85	18.83
Bra013708.1-P	Field mustard	nucleus	16.92	18.58
Bra022612.1-P	Field mustard	nucleus	18.77	17.73
Bra005388.1-P	Field mustard	nucleus	20.0	16.13
Bra021934.1-P	Field mustard	nucleus	19.38	15.91
Bra026228.1-P	Field mustard	nucleus	19.38	15.91
Bra041029.1-P	Field mustard	nucleus	19.69	15.72

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra032084	EnsemblPlants:Bra032084.1	EnsemblPlants:Bra032084.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605
GO:GO:0009607	GO:GO:0009719	GO:GO:0009987	GO:GO:0010200	GO:GO:0042742	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	UniProt:M4ETF3	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF15	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002544B65	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom	SEG:seg	:	:	:

Description

AT2G24570 (E=5e-117) WRKY17, ATWRKY17 | WRKY17; calmodulin binding / transcription factor

Coordinates

chrA04:-:10984430..10985845

Molecular Weight (calculated)

35314.1 Da

IEP (calculated)

10.575

GRAVY (calculated)

-0.512

Length

325 amino acids

Sequence
(BLAST)

001: MTVDIMRFPK MEDQTAMQEA ASQGLKSMEH LISVLSNRPK DHNAGCSEIT DFTVSKFKKV ISLLNRTGHA RFRRGPVQSP LSSSSSSAAS PPLPPVSQPT
101: PPSQLSPTAP VVTPGRFVQS HPQSLTLDFT RPTVFGAKTK STEIVEFAKE SFSVSSNSSF MSSAITGDGS VSKGSSIFLA PAPVASSGKP PLAGLPYRKR
201: CFEHDHSQNF SGKISGSGSG KCHCKKSRKN RMKRSVRVPA ISAKIADIPV DEYSWRKYGQ KPIKGSPHPR GYYKCSTFRG CPARKHVERA LDDPTMLIVT
301: YEGEHRHQKS AMNENISSSL VFGSA

Best Arabidopsis Sequence Match ( AT2G24570.1 )
(BLAST)

001: MTVDIMRLPK MEDQTAIQEA ASQGLKSMEH LIRVLSNRPE ERNVDCSEIT DFTVSKFKKV ISLLNRSGHA RFRRGPVHSP PSSSVPPPVK VTTPAPTQIS
101: APAPVSFVQA NQQSVTLDFT RPSVFGAKTK SSEVVEFAKE SFSVSSNSSF MSSAITGDGS VSKGSSIFLA PAPAVPVTSS GKPPLSGLPY RKRCFEHDHS
201: EGFSGKISGS GNGKCHCKKS RKNRMKRTVR VPAVSAKIAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCST FRGCPARKHV ERALDDSTML IVTYEGEHRH
301: HQSTMQEHVT PSVSGLVFGS A

Arabidopsis Description

WRKY17Uncharacterized protein At2g24570 [Source:UniProtKB/TrEMBL;Acc:Q0WTF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.