Factsheet for Bra013779.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 5
nucleus 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003251.1-P
Bra007269.1-P
Bra014671.1-P
Bra036126.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24240.1	Bra003251.1-P	AT3G56800.1	15733871
AT4G24240.1	Bra007269.1-P	AT3G56800.1	15733871
AT4G24240.1	Bra014671.1-P	AT3G56800.1	15733871
AT4G24240.1	Bra036126.1-P	AT5G28900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03470	Canola	nucleus	88.81	37.57
CDY34269	Canola	nucleus	100.0	35.66
AT4G24240.1	Thale cress	nucleus	84.62	34.28
Bra019239.1-P	Field mustard	nucleus	81.12	33.33
VIT_18s0001g10030.t01	Wine grape	nucleus	68.53	30.72
Solyc04g078550.2.1	Tomato	nucleus	69.93	28.49
PGSC0003DMT400020517	Potato	nucleus	69.23	27.97
Bra011282.1-P	Field mustard	nucleus	59.44	26.4
Bra032174.1-P	Field mustard	nucleus	58.04	26.02
Bra032084.1-P	Field mustard	nucleus	58.74	25.85
Bra040396.1-P	Field mustard	nucleus	53.15	25.08
Bra023998.1-P	Field mustard	nucleus	57.34	25.0
Bra010231.1-P	Field mustard	nucleus	57.34	24.7
Bra001117.1-P	Field mustard	nucleus	54.55	24.45
Bra022808.1-P	Field mustard	nucleus	57.34	24.26
Bra021652.1-P	Field mustard	nucleus	53.15	23.68
Bra018303.1-P	Field mustard	nucleus	54.55	23.28
Bra010005.1-P	Field mustard	nucleus	54.55	22.87
Bra020617.1-P	Field mustard	nucleus	53.15	22.55
Bra010839.1-P	Field mustard	nucleus	39.16	21.46
Bra032300.1-P	Field mustard	nucleus	38.46	20.99
Bra007413.1-P	Field mustard	nucleus	37.76	20.0
Bra014556.1-P	Field mustard	nucleus	37.06	19.06
Bra037368.1-P	Field mustard	nucleus	35.66	17.11
Bra019297.1-P	Field mustard	nucleus	32.87	15.72
Bra020814.1-P	Field mustard	nucleus	33.57	15.58
Bra013708.1-P	Field mustard	nucleus	32.17	15.54
Bra022612.1-P	Field mustard	nucleus	36.36	15.12
Bra026228.1-P	Field mustard	nucleus	39.86	14.39
Bra041029.1-P	Field mustard	nucleus	39.16	13.76
Bra005388.1-P	Field mustard	nucleus	37.76	13.4
Bra021934.1-P	Field mustard	nucleus	36.36	13.13

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra013779	EnsemblPlants:Bra013779.1	EnsemblPlants:Bra013779.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DBB9	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF70
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000254627D	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom
SEG:seg	:	:	:	:	:

Description

AT4G24240 (E=9e-059) WRKY7, ATWRKY7 | WRKY7; calmodulin binding / transcription factor

Coordinates

chrA01:+:7725325..7726649

Molecular Weight (calculated)

16004.3 Da

IEP (calculated)

10.606

GRAVY (calculated)

-0.729

Length

143 amino acids

Sequence
(BLAST)

001: MSSGFEFTNP SSQISGSIGK PPLSSVSLKR RCDSSPSSRC HCTKKRKSRV KRVIRVPAVS SKMADIPSDE YSWRKYGQKP IKGSPHPRGY YKCSSVRGCP
101: ARKHVERALD DAMMLIVTYE GDHNHALCQT DRHNPVMRAL KLA

Best Arabidopsis Sequence Match ( AT4G24240.1 )
(BLAST)

001: MTVELMMSSY SGGGGGGDGF PAIAAAAKME DTALREAASA GIHGVEEFLK LIGQSQQPTE KSQTEITAVT DVAVNSFKKV ISLLGRSRTG HARFRRAPAS
101: TQTPFKQTPV VEEEVEVEEK KPETSSVLTK QKTEQYHGGG SAFRVYCPTP IHRRPPLSHN NNNNQNQTKN GSSSSSPPML ANGAPSTINF APSPPVSATN
201: SFMSSHRCDT DSTHMSSGFE FTNPSQLSGS RGKPPLSSAS LKRRCNSSPS SRCHCSKKRK SRVKRVIRVP AVSSKMADIP SDEFSWRKYG QKPIKGSPHP
301: RGYYKCSSVR GCPARKHVER ALDDAMMLIV TYEGDHNHAL VLETTTMNHD KTL

Arabidopsis Description

WRKY7Probable WRKY transcription factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.