Factsheet for Zm00001d024376_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d014037_P004
Zm00001d028948_P001
Zm00001d032708_P009
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT2G24570.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT2G24570.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d052415_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d014037_P004	AT5G28900.1	21798944
AT2G24570.1	Zm00001d032708_P009	AT5G28900.1	21798944
AT4G31550.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT4G31550.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT4G31550.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d052415_P001	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14755	Sorghum	nucleus	81.35	79.56
Zm00001d050195_P001	Maize	nucleus	76.21	77.45
TraesCS5D01G382600.1	Wheat	nucleus	52.73	54.67
TraesCS5A01G060200.1	Wheat	nucleus	51.77	54.58
TraesCS5B01G375100.1	Wheat	nucleus	52.41	54.52
TraesCS5B01G067700.1	Wheat	nucleus	52.09	54.36
TraesCS5D01G071800.1	Wheat	nucleus	51.45	54.05
TraesCS5A01G373100.1	Wheat	nucleus	51.77	54.03
HORVU5Hr1G092770.2	Barley	mitochondrion	50.8	52.84
Zm00001d002405_P001	Maize	nucleus	50.16	52.35
Zm00001d026252_P001	Maize	nucleus	53.05	52.22
HORVU5Hr1G015120.1	Barley	nucleus	49.84	51.32
Os08t0235800-00	Rice	nucleus	55.63	50.29
GSMUA_Achr9P22950_001	Banana	nucleus	41.8	46.26
CDY20325	Canola	nucleus	40.84	44.88
Solyc08g006320.2.1	Tomato	nucleus	45.98	43.6
CDX72310	Canola	nucleus	39.55	43.31
PGSC0003DMT400024632	Potato	nucleus	46.3	43.11
CDY60852	Canola	nucleus	41.16	42.95
CDX68763	Canola	nucleus	40.51	42.28
GSMUA_Achr3P27880_001	Banana	nucleus	37.3	42.18
CDY13441	Canola	nucleus	39.55	41.98
CDY45583	Canola	nucleus	42.77	40.92
CDY23304	Canola	nucleus	40.19	40.85
CDY36432	Canola	nucleus	36.98	40.78
Bra011282.1-P	Field mustard	nucleus	42.12	40.68
AT4G31550.1	Thale cress	nucleus	42.44	40.62
Bra032084.1-P	Field mustard	nucleus	42.44	40.62
AT2G24570.1	Thale cress	nucleus	41.48	40.19
Bra023998.1-P	Field mustard	nucleus	42.12	39.94
PGSC0003DMT400075531	Potato	nucleus	39.87	39.74
Zm00001d004086_P001	Maize	nucleus	41.8	39.27
Bra010231.1-P	Field mustard	nucleus	41.48	38.86
Solyc12g096350.1.1	Tomato	nucleus	39.23	36.09
Zm00001d016457_P001	Maize	nucleus	32.48	31.08
Zm00001d033291_P007	Maize	nucleus	29.58	25.99
Zm00001d041397_P001	Maize	nucleus	29.26	24.8
Zm00001d013709_P003	Maize	nucleus	29.26	24.66
Zm00001d030969_P001	Maize	nucleus	29.26	24.33
Zm00001d013307_P003	Maize	nucleus	30.55	24.05
Zm00001d033965_P001	Maize	nucleus	29.9	23.43
Zm00001d037054_P001	Maize	nucleus	16.4	20.32
Zm00001d012746_P001	Maize	nucleus	18.01	20.22
Zm00001d043474_P001	Maize	nucleus	18.01	18.3
Zm00001d043569_P001	Maize	cytosol	16.72	18.12
Zm00001d044171_P001	Maize	nucleus	19.94	17.97
Zm00001d009698_P001	Maize	nucleus	19.94	17.87
Zm00001d011403_P001	Maize	nucleus	18.97	16.91
Zm00001d008578_P001	Maize	nucleus	18.33	16.72
Zm00001d053369_P001	Maize	nucleus	19.61	16.53
Zm00001d016052_P001	Maize	nucleus	19.94	16.19
Zm00001d030139_P001	Maize	nucleus	22.83	16.14
Zm00001d034888_P001	Maize	nucleus	19.61	16.05
Zm00001d017712_P001	Maize	nucleus	22.83	14.67
Zm00001d051550_P001	Maize	nucleus	21.86	14.59
Zm00001d002452_P001	Maize	nucleus	23.15	14.26
Zm00001d034475_P001	Maize	cytosol	13.83	13.23
Zm00001d026218_P001	Maize	nucleus	14.47	10.3

Protein Annotations

EntrezGene:100285526	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:AQK41089.1	UniProt:B6U600	EMBL:EU972665
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF32
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000182E887	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d024376
EnsemblPlants:Zm00001d024376_P001	EnsemblPlants:Zm00001d024376_T001	InterPro:Zn-cluster-dom	SEG:seg	:	:

Description

WRKY-transcription factor 67Putative WRKY DNA-binding domain superfamily protein%3B WRKY25-superfamily of TFs having WRKY and zinc finger domains

Coordinates

chr10:+:67963922..67964857

Molecular Weight (calculated)

31890.4 Da

IEP (calculated)

9.889

GRAVY (calculated)

-0.468

Length

311 amino acids

Sequence
(BLAST)

001: MAVDLMSCGG GAYEQLAFQE AAAAGLRSLE LLASSLSPCG AGRAESPPLG QIADQAVSRF RRVINLLDRT GHARFRRAPA VAAVEPIETE TPASQQAAAE
101: PPHQAQNKAL TLDFAKSVPP AANKKAPRAP AVSATSTSFL SSVTAGGEGS VSKGCSLAAV SSGKPPLPKR TSPCPAAAPP GAHHAESGAG GCHCSKKKRS
201: RQGLSRRTVR LPAAAATPGS QPPGHVPASS DVPHDEYSWR KYGQKPIKGS PYPRGYYRCS SAKGCPARKH VERAADDPAV LVVTYEGDHR HDGDGDGDGG
301: VGAGAARSRA A

Best Arabidopsis Sequence Match ( AT2G24570.1 )
(BLAST)

001: MTVDIMRLPK MEDQTAIQEA ASQGLKSMEH LIRVLSNRPE ERNVDCSEIT DFTVSKFKKV ISLLNRSGHA RFRRGPVHSP PSSSVPPPVK VTTPAPTQIS
101: APAPVSFVQA NQQSVTLDFT RPSVFGAKTK SSEVVEFAKE SFSVSSNSSF MSSAITGDGS VSKGSSIFLA PAPAVPVTSS GKPPLSGLPY RKRCFEHDHS
201: EGFSGKISGS GNGKCHCKKS RKNRMKRTVR VPAVSAKIAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCST FRGCPARKHV ERALDDSTML IVTYEGEHRH
301: HQSTMQEHVT PSVSGLVFGS A

Arabidopsis Description

WRKY17Uncharacterized protein At2g24570 [Source:UniProtKB/TrEMBL;Acc:Q0WTF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.