Factsheet for Os08t0235800-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os10t0476600-01
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	Os01t0267900-01	AT3G56800.1	15733871
AT2G24570.1	Os01t0279300-01	AT3G56800.1	15733871
AT2G24570.1	Os01t0810300-01	AT3G56800.1	15733871
AT2G24570.1	Os03t0319300-01	AT3G56800.1	15733871
AT2G24570.1	Os05t0491000-01	AT3G56800.1	15733871
AT2G24570.1	Os05t0491100-01	AT3G56800.1	15733871
AT2G24570.1	Os07t0687200-02	AT3G56800.1	15733871
AT2G24570.1	Os12t0603800-00	AT3G56800.1	15733871
AT2G24570.1	Os10t0476600-01	AT5G28900.1	21798944
AT4G31550.1	Os01t0267900-01	AT3G56800.1	15733871
AT4G31550.1	Os01t0279300-01	AT3G56800.1	15733871
AT4G31550.1	Os01t0810300-01	AT3G56800.1	15733871
AT4G31550.1	Os03t0319300-01	AT3G56800.1	15733871
AT4G31550.1	Os05t0491000-01	AT3G56800.1	15733871
AT4G31550.1	Os05t0491100-01	AT3G56800.1	15733871
AT4G31550.1	Os07t0687200-02	AT3G56800.1	15733871
AT4G31550.1	Os12t0603800-00	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G375100.1	Wheat	nucleus	56.69	65.22
TraesCS5D01G382600.1	Wheat	nucleus	56.4	64.67
TraesCS5A01G373100.1	Wheat	nucleus	55.81	64.43
TraesCS5D01G071800.1	Wheat	nucleus	54.36	63.18
Os04t0605100-01	Rice	nucleus	56.69	63.11
TraesCS5B01G067700.1	Wheat	nucleus	54.36	62.75
HORVU5Hr1G092770.2	Barley	mitochondrion	54.36	62.54
TraesCS5A01G060200.1	Wheat	nucleus	53.49	62.37
HORVU5Hr1G015120.1	Barley	nucleus	51.45	58.61
Zm00001d050195_P001	Maize	nucleus	50.0	56.21
EES14755	Sorghum	nucleus	51.74	55.97
Zm00001d024376_P001	Maize	nucleus	50.29	55.63
GSMUA_Achr9P22950_001	Banana	nucleus	42.73	52.31
CDY20325	Canola	nucleus	40.41	49.12
Os04t0287400-01	Rice	nucleus	45.64	48.16
CDY60852	Canola	nucleus	41.57	47.99
CDX72310	Canola	nucleus	39.53	47.89
CDX68763	Canola	nucleus	41.28	47.65
CDY45583	Canola	nucleus	43.6	46.15
Bra032084.1-P	Field mustard	nucleus	43.6	46.15
CDY23304	Canola	nucleus	40.99	46.08
CDY13441	Canola	nucleus	39.24	46.08
Bra011282.1-P	Field mustard	nucleus	43.02	45.96
AT4G31550.1	Thale cress	nucleus	43.31	45.85
GSMUA_Achr3P27880_001	Banana	nucleus	36.63	45.82
AT2G24570.1	Thale cress	nucleus	42.44	45.48
CDY36432	Canola	nucleus	36.92	45.04
Solyc08g006320.2.1	Tomato	nucleus	42.73	44.82
PGSC0003DMT400024632	Potato	nucleus	43.31	44.61
Bra023998.1-P	Field mustard	nucleus	42.15	44.21
PGSC0003DMT400075531	Potato	nucleus	39.83	43.91
Bra010231.1-P	Field mustard	nucleus	41.57	43.07
Os02t0462800-01	Rice	nucleus	31.1	42.29
Solyc12g096350.1.1	Tomato	nucleus	37.5	38.17
Os12t0597700-01	Rice	nucleus	29.94	28.37
Os03t0798500-01	Rice	nucleus	29.94	27.11
Os03t0741400-01	Rice	nucleus	29.94	26.61
Os02t0265200-01	Rice	nucleus	19.19	18.28
Os01t0750100-03	Rice	nucleus	16.28	17.72
Os01t0624700-01	Rice	nucleus	17.44	17.24
Os06t0504900-00	Rice	nucleus	18.31	16.32
Os01t0730700-01	Rice	nucleus	15.12	16.3
Os03t0855100-01	Rice	nucleus	18.31	16.28
Os04t0597300-01	Rice	nucleus	18.6	15.46
Os02t0698800-01	Rice	nucleus	21.8	14.82

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A0P0XDH4	ProteinID:BAT04463.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os08g0235800
EnsemblPlants:Os08t0235800-00	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF32
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000393BF3A	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom
SEG:seg	:	:	:	:	:

Description

WRKY GENE 25Similar to WRKY transcription factor 25. (Os08t0235800-00)

Coordinates

chr8:-:8258523..8259611

Molecular Weight (calculated)

36456.4 Da

IEP (calculated)

11.417

GRAVY (calculated)

-0.495

Length

344 amino acids

Sequence
(BLAST)

001: LTISPSTHHP TQLKHLLLLH RQTQQRRARS RLRLRRPMAV DLMGFSPRGG CRPSVETEQL AFQEAAAAGL RSLELLVSSL SAGGEHHHRR RPQEKQSSPP
101: LGEIADQAVS RFRKVISILD RTGHARFRRG PVVGAAAAEA AAAAASASPS SSPVSPPLPP VTTQPAAAVK SLTLDFTNPA KVAAASVTST SFFSSVTAGG
201: DGSVSKGRSL VSSGKPPLAG GVKRKHPHPP CAAAGDGHGH GAGHAHAHGG CHCSKKRKQR VRRTVRVAAA SARVADIPAD EYSWRKYGQK PIKGSPYPRG
301: YYRCSTVKGC PARKHVERAA DDPATLVVTY EGDHRHSPPP PPLV

Best Arabidopsis Sequence Match ( AT4G31550.1 )
(BLAST)

001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA

Arabidopsis Description

WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.