Factsheet for Os04t0287400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os10t0476600-01
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	Os01t0267900-01	AT3G56800.1	15733871
AT2G24570.1	Os01t0279300-01	AT3G56800.1	15733871
AT2G24570.1	Os01t0810300-01	AT3G56800.1	15733871
AT2G24570.1	Os03t0319300-01	AT3G56800.1	15733871
AT2G24570.1	Os05t0491000-01	AT3G56800.1	15733871
AT2G24570.1	Os05t0491100-01	AT3G56800.1	15733871
AT2G24570.1	Os07t0687200-02	AT3G56800.1	15733871
AT2G24570.1	Os12t0603800-00	AT3G56800.1	15733871
AT2G24570.1	Os10t0476600-01	AT5G28900.1	21798944
AT4G31550.1	Os01t0267900-01	AT3G56800.1	15733871
AT4G31550.1	Os01t0279300-01	AT3G56800.1	15733871
AT4G31550.1	Os01t0810300-01	AT3G56800.1	15733871
AT4G31550.1	Os03t0319300-01	AT3G56800.1	15733871
AT4G31550.1	Os05t0491000-01	AT3G56800.1	15733871
AT4G31550.1	Os05t0491100-01	AT3G56800.1	15733871
AT4G31550.1	Os07t0687200-02	AT3G56800.1	15733871
AT4G31550.1	Os12t0603800-00	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G269200.1	Wheat	nucleus	80.37	83.71
TraesCS2A01G270200.2	Wheat	nucleus	80.67	82.19
Zm00001d004086_P001	Maize	nucleus	78.53	77.34
GSMUA_Achr7P15930_001	Banana	nucleus	57.36	66.31
GSMUA_Achr10P...	Banana	nucleus	51.84	63.3
GSMUA_Achr5P21910_001	Banana	nucleus	49.39	63.14
CDY20325	Canola	nucleus	50.61	58.3
CDX72310	Canola	nucleus	50.61	58.1
CDY60852	Canola	nucleus	51.23	56.04
CDY13441	Canola	nucleus	49.69	55.29
CDX68763	Canola	nucleus	50.31	55.03
Bra011282.1-P	Field mustard	nucleus	53.99	54.66
CDY36432	Canola	nucleus	47.24	54.61
Os04t0605100-01	Rice	nucleus	51.53	54.37
AT2G24570.1	Thale cress	nucleus	53.07	53.89
AT4G31550.1	Thale cress	nucleus	53.07	53.23
CDY23304	Canola	nucleus	49.69	52.94
Bra023998.1-P	Field mustard	nucleus	53.07	52.74
CDY45583	Canola	nucleus	51.23	51.38
Bra032084.1-P	Field mustard	nucleus	50.92	51.08
Bra010231.1-P	Field mustard	nucleus	51.84	50.9
PGSC0003DMT400024632	Potato	nucleus	50.31	49.1
PGSC0003DMT400075531	Potato	nucleus	46.93	49.04
Solyc08g006320.2.1	Tomato	nucleus	49.08	48.78
Os02t0462800-01	Rice	nucleus	37.73	48.62
Os08t0235800-00	Rice	nucleus	48.16	45.64
Solyc12g096350.1.1	Tomato	nucleus	46.01	44.38
Os12t0597700-01	Rice	nucleus	34.97	31.41
Os03t0741400-01	Rice	nucleus	34.05	28.68
Os03t0798500-01	Rice	nucleus	30.98	26.58
Os01t0624700-01	Rice	nucleus	20.86	19.54
Os02t0265200-01	Rice	nucleus	19.94	18.01
Os01t0750100-03	Rice	nucleus	16.56	17.09
Os01t0730700-01	Rice	nucleus	16.26	16.61
Os03t0855100-01	Rice	nucleus	19.63	16.54
Os06t0504900-00	Rice	nucleus	18.1	15.29
Os04t0597300-01	Rice	nucleus	19.33	15.22
Os02t0698800-01	Rice	nucleus	20.55	13.24

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4335388	EMBL:AK100954	ProteinID:BAF14295.1	ProteinID:BAS88402.1
ProteinID:CAD40422.3	ProteinID:EEE60680.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003682
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009737	GO:GO:0009739
GO:GO:0009938	GO:GO:0009987	GO:GO:0043565	GO:GO:1990841	EMBL:HQ858832	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlantsGene:Os04g0287400	EnsemblPlants:Os04t0287400-01	PFAM:PF03106	PFAM:PF10533	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF15	UniProt:Q0JEE2	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0000DD8FC8
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_015633572.1	InterPro:Zn-cluster-dom	SEG:seg	:

Description

WRKY GENE 51WRKY transcription factor, Positive regulator in defense response, Negative regulator in GA signaling (Os04t0287400-01)

Coordinates

chr4:+:12425564..12426962

Molecular Weight (calculated)

34306.8 Da

IEP (calculated)

10.330

GRAVY (calculated)

-0.504

Length

326 amino acids

Sequence
(BLAST)

001: MITMDLMGGY GRVDEQVAIQ EAAAAGLRGM EHLILQLSQT GTSERSPAPA QEQQQQVDCR EITDMTVSKF KKVISMLNRT GHARFRRGPV VAQSSGPAAS
101: EPAPVRSSPS AVSRPMTLDF TKAASGYGKD AGFSVSGISA ASSSFLSSVT GDGSVSNGRG GGSSSLMLPP PPATSCGKPP LSSAAAAMSA GAGHKRKCHD
201: HAHSENVAGG KYGSTGGRCH CSKRRKHRVK RTIRVPAISS KVADIPADDF SWRKYGQKPI KGSPFPRGYY KCSTLRGCPA RKHVERDPTD PSMLIVTYEG
301: EHRHSPSAAG QDHPPAPPPP LALPLA

Best Arabidopsis Sequence Match ( AT4G31550.1 )
(BLAST)

001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA

Arabidopsis Description

WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.