Factsheet for Os12t0597700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04670.1	Os01t0267900-01	AT3G56800.1	15733871
AT3G04670.1	Os01t0279300-01	AT3G56800.1	15733871
AT3G04670.1	Os01t0810300-01	AT3G56800.1	15733871
AT3G04670.1	Os03t0319300-01	AT3G56800.1	15733871
AT3G04670.1	Os05t0491000-01	AT3G56800.1	15733871
AT3G04670.1	Os05t0491100-01	AT3G56800.1	15733871
AT3G04670.1	Os07t0687200-02	AT3G56800.1	15733871
AT3G04670.1	Os12t0603800-00	AT3G56800.1	15733871
AT5G28650.1	Os01t0267900-01	AT3G56800.1	15733871
AT5G28650.1	Os01t0279300-01	AT3G56800.1	15733871
AT5G28650.1	Os01t0810300-01	AT3G56800.1	15733871
AT5G28650.1	Os03t0319300-01	AT3G56800.1	15733871
AT5G28650.1	Os05t0491000-01	AT3G56800.1	15733871
AT5G28650.1	Os05t0491100-01	AT3G56800.1	15733871
AT5G28650.1	Os07t0687200-02	AT3G56800.1	15733871
AT5G28650.1	Os12t0603800-00	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G066400.1	Wheat	nucleus	77.41	79.15
TraesCS5D01G070700.1	Wheat	nucleus	76.86	78.37
TraesCS5A01G059100.1	Wheat	nucleus	76.31	78.03
EES17321	Sorghum	nucleus	77.14	75.47
Zm00001d041397_P001	Maize	nucleus	74.1	73.3
Zm00001d030969_P001	Maize	nucleus	69.97	67.91
GSMUA_Achr10P...	Banana	nucleus	49.86	59.93
VIT_07s0141g00680.t01	Wine grape	nucleus	51.24	54.71
Solyc09g066010.2.1	Tomato	nucleus	49.59	54.38
PGSC0003DMT400038986	Potato	nucleus	49.86	52.31
KRH71315	Soybean	nucleus	50.96	52.11
Bra040396.1-P	Field mustard	nucleus	42.42	50.83
Bra001117.1-P	Field mustard	nucleus	44.63	50.78
CDY50747	Canola	nucleus	41.87	50.16
Solyc06g008610.2.1	Tomato	nucleus	47.93	50.0
CDY40667	Canola	nucleus	43.53	49.69
CDX74175	Canola	nucleus	43.8	49.53
AT5G28650.1	Thale cress	nucleus	44.9	49.39
AT3G04670.1	Thale cress	nucleus	44.9	49.39
PGSC0003DMT400013632	Potato	nucleus	47.93	49.01
CDY05601	Canola	nucleus	45.45	48.96
CDY41890	Canola	nucleus	42.15	48.88
Bra010005.1-P	Field mustard	nucleus	45.73	48.68
CDX86205	Canola	nucleus	45.73	48.68
CDY48658	Canola	nucleus	45.18	48.66
KRH67313	Soybean	nucleus	45.45	48.39
Bra020617.1-P	Field mustard	nucleus	44.9	48.37
CDY33884	Canola	nucleus	44.9	48.37
KRH32116	Soybean	extracellular	50.69	46.94
Os03t0741400-01	Rice	nucleus	49.86	46.77
Os04t0605100-01	Rice	nucleus	32.23	37.86
Os02t0462800-01	Rice	nucleus	25.07	35.97
Os03t0798500-01	Rice	nucleus	37.47	35.79
Os04t0287400-01	Rice	nucleus	31.41	34.97
Os08t0235800-00	Rice	nucleus	28.37	29.94
Os02t0265200-01	Rice	nucleus	17.63	17.73
Os01t0624700-01	Rice	nucleus	16.53	17.24
Os01t0750100-03	Rice	nucleus	14.88	17.09
Os01t0730700-01	Rice	nucleus	14.33	16.3
Os03t0855100-01	Rice	nucleus	16.8	15.76
Os04t0597300-01	Rice	nucleus	17.91	15.7
Os06t0504900-00	Rice	nucleus	14.88	13.99
Os02t0698800-01	Rice	nucleus	19.01	13.64

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4352708	ProteinID:ABA99244.1	ProteinID:BAF30216.1	ProteinID:BAT17936.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os12g0597700	EnsemblPlants:Os12t0597700-01	PFAM:PF03106
PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF23	UniProt:Q2QMN4	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0000680CCC	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_015620342.1	InterPro:Zn-cluster-dom
SEG:seg	:	:	:	:	:

Description

WRKY GENE 94Similar to WRKY2 (Fragment). (Os12t0597700-01);Similar to WRKY DNA binding domain containing protein, expressed. (Os12t0597700-02)

Coordinates

chr12:-:25101042..25104175

Molecular Weight (calculated)

38534.9 Da

IEP (calculated)

10.467

GRAVY (calculated)

-0.555

Length

363 amino acids

Sequence
(BLAST)

001: MEEEVEAANR AAVESCHRVL ALLSQQQDPA LLRSIASETG EACAKFRKVV SLLGNGGGGG GGGGGGGHAR GRMAGRSRPS AVLREKGFLE SSSGGGQLGM
101: MMSGAATPST SSAAHLRNRI GGGSGVPPDS LRGLDLVSSS SKGGAHQFDP PKLVQPLSVQ FQFGATAHRY PFQQHQHQQK LQAEMFKRSN SGISLKFDSP
201: SATGTMSSAF MSSLSMDGSV ASLEGKPPFH LISGPVASDP VNAHHVPKRR CTGRGEDGSG KCATTGRCHC SKRRKLRIKR SIKVPAISNK IADIPPDEYS
301: WRKYGQKPIK GSPHPRGYYK CSSVRGCPAR KHVERCVDDP AMLIVTYEGE HNHTRLPTQS AQT

Best Arabidopsis Sequence Match ( AT5G28650.1 )
(BLAST)

001: MEEVEAANKA AVESCHGVLN LLSQQTNDSK SIMVETREAV CKFKRVSSLL SRGLGQRKIK KLNNNNYKFS SSLLPQHMFL ESPVCSNNAI SGCIPILAPK
101: PLQIVPAGPP PLMLFNQNMC LDKSFLELKP PSSRAVDPKP YQFIHTHQQG VYSRSKSGLN LKFDGSIGAS CYSPSISNGS RSFVSSLSMD GSVTDYDRNS
201: FHLIGLPQGS DHISQHSRRT SCSGSLKCGS KSKCHCSKKR KLRVKRSIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE
301: RCVEETSMLI VTYEGEHNHS RILSSQSAHT

Arabidopsis Description

WRKY74Probable WRKY transcription factor 74 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.