Factsheet for Zm00001d016457_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d014037_P004
Zm00001d028948_P001
Zm00001d032708_P009
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24570.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT2G24570.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT2G24570.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d052415_P001	AT3G56800.1	15733871
AT2G24570.1	Zm00001d014037_P004	AT5G28900.1	21798944
AT2G24570.1	Zm00001d032708_P009	AT5G28900.1	21798944
AT4G31550.1	Zm00001d005003_P002	AT3G56800.1	15733871
AT4G31550.1	Zm00001d008278_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d010649_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d028948_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d038543_P004	AT3G56800.1	15733871
AT4G31550.1	Zm00001d038545_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d041430_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d043144_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d047597_P001	AT3G56800.1	15733871
AT4G31550.1	Zm00001d052415_P001	AT3G56800.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84894	Sorghum	nucleus	73.54	79.93
Os02t0462800-01	Rice	nucleus	45.54	58.5
GSMUA_Achr9P22950_001	Banana	nucleus	39.08	45.2
Zm00001d002405_P001	Maize	nucleus	38.15	41.61
CDY36432	Canola	nucleus	34.77	40.07
Zm00001d004086_P001	Maize	nucleus	39.69	38.97
Zm00001d026252_P001	Maize	nucleus	37.85	38.92
CDY23304	Canola	nucleus	36.62	38.89
CDX72310	Canola	nucleus	33.85	38.73
CDX68763	Canola	nucleus	35.38	38.59
CDY60852	Canola	nucleus	35.08	38.26
CDY20325	Canola	nucleus	32.92	37.81
CDY13441	Canola	nucleus	33.85	37.54
GSMUA_Achr3P27880_001	Banana	nucleus	31.69	37.45
Bra011282.1-P	Field mustard	nucleus	36.62	36.96
AT4G31550.1	Thale cress	nucleus	36.92	36.92
Bra010231.1-P	Field mustard	nucleus	37.54	36.75
Bra023998.1-P	Field mustard	nucleus	36.0	35.67
AT2G24570.1	Thale cress	nucleus	35.08	35.51
Bra032084.1-P	Field mustard	nucleus	35.38	35.38
Solyc08g006320.2.1	Tomato	nucleus	35.69	35.37
PGSC0003DMT400024632	Potato	nucleus	36.31	35.33
CDY45583	Canola	nucleus	35.08	35.08
PGSC0003DMT400075531	Potato	nucleus	32.0	33.33
Zm00001d050195_P001	Maize	nucleus	30.77	32.68
Zm00001d024376_P001	Maize	nucleus	31.08	32.48
Solyc12g096350.1.1	Tomato	nucleus	30.46	29.29
Zm00001d033291_P007	Maize	nucleus	29.54	27.12
Zm00001d030969_P001	Maize	nucleus	30.46	26.47
Zm00001d041397_P001	Maize	nucleus	29.85	26.43
Zm00001d013709_P003	Maize	nucleus	28.92	25.47
Zm00001d033965_P001	Maize	nucleus	28.92	23.68
Zm00001d013307_P003	Maize	nucleus	28.62	23.54
Zm00001d037054_P001	Maize	nucleus	15.69	20.32
Zm00001d012746_P001	Maize	nucleus	16.0	18.77
Zm00001d043569_P001	Maize	cytosol	16.0	18.12
Zm00001d043474_P001	Maize	nucleus	16.31	17.32
Zm00001d044171_P001	Maize	nucleus	17.85	16.81
Zm00001d009698_P001	Maize	nucleus	17.54	16.43
Zm00001d008578_P001	Maize	nucleus	16.92	16.13
Zm00001d011403_P001	Maize	nucleus	16.62	15.47
Zm00001d053369_P001	Maize	nucleus	16.92	14.91
Zm00001d034888_P001	Maize	nucleus	16.92	14.47
Zm00001d030139_P001	Maize	nucleus	18.46	13.64
Zm00001d016052_P001	Maize	nucleus	15.69	13.32
Zm00001d051550_P001	Maize	nucleus	17.85	12.45
Zm00001d017712_P001	Maize	nucleus	18.15	12.19
Zm00001d002452_P001	Maize	nucleus	17.85	11.49
Zm00001d034475_P001	Maize	cytosol	8.0	8.0
Zm00001d026218_P001	Maize	nucleus	9.85	7.32

Protein Annotations

EntrezGene:103627147	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6H7X4	ProteinID:AQK70850.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFAM:PF10533	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF15	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000221E531	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d016457	EnsemblPlants:Zm00001d016457_P001
EnsemblPlants:Zm00001d016457_T001	InterPro:Zn-cluster-dom	SEG:seg	:	:	:

Description

WRKY-transcription factor 78Probable WRKY transcription factor 11

Coordinates

chr5:+:162995367..162996627

Molecular Weight (calculated)

34406.9 Da

IEP (calculated)

9.150

GRAVY (calculated)

-0.762

Length

325 amino acids

Sequence
(BLAST)

001: MITVDDDQVR SCGGDSGGIP VPTSDDAAAG RQMLTTMGEH HQQQLTVSRI RTAVSMLTRR TGHARFRRGP VAERHHASSS DHHQLRPPAA GGGVALDLDL
101: LVAKTCDDAA AGFSASASWT SSSLPSTTSL TAGEGSVSKG RAQQQGCGAL FFVQPVSGGG GDGHSAGKPL RLAPSSMQQQ HACPGYSSPG NALEDGKCHD
201: RARSENDAAA AAGKTHGDRC HCSNKRKSRV KRVVRVPAIS SRNADIPPDD HSWRKYGQKP IKGSPYPRGY YKCSTVRGCP ARKHVERDPG EPSMLIVTYE
301: GDHRHEDRPA GGGAQTDQDR TTTSS

Best Arabidopsis Sequence Match ( AT4G31550.1 )
(BLAST)

001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA

Arabidopsis Description

WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.