CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034888_P001	Maize	nucleus	76.79	79.21
Os03t0855100-01	Rice	nucleus	55.87	56.59
HORVU5Hr1G124320.1	Barley	nucleus	49.74	55.08
TraesCS5D01G564500.2	Wheat	nucleus	51.28	54.92
TraesCS4A01G320800.2	Wheat	nucleus	51.53	54.74
TraesCS5B01G558100.2	Wheat	nucleus	51.79	54.72
GSMUA_Achr11P...	Banana	nucleus	29.59	29.59
OQU92055	Sorghum	nucleus	29.59	27.17
KXG27029	Sorghum	nucleus	34.44	26.73
EES07413	Sorghum	nucleus	31.89	25.15
EES04883	Sorghum	nucleus	23.47	24.53
EES03611	Sorghum	nucleus	19.13	24.19
EES03563	Sorghum	plastid	18.88	23.2
EER89819	Sorghum	nucleus	20.15	22.57
EES03310	Sorghum	nucleus, plastid	23.72	22.52
KXG22622	Sorghum	nucleus	20.41	21.98
EES11384	Sorghum	nucleus	16.33	20.32
EES14755	Sorghum	nucleus	15.56	19.18
OQU84894	Sorghum	nucleus	14.03	18.39
EER91209	Sorghum	nucleus	15.82	17.61
EES17321	Sorghum	nucleus	16.07	16.98
KXG37354	Sorghum	nucleus	16.84	15.21
EER93478	Sorghum	nucleus	15.31	14.78

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1B6QGP2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlants:KXG37092	ProteinID:KXG37092
ProteinID:KXG37092.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF28	SMART:SM00774
EnsemblPlantsGene:SORBI_3001G006600	SUPFAM:SSF118290	UniParc:UPI0003C6CA03	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:665653..669559

Molecular Weight (calculated)

42503.9 Da

IEP (calculated)

6.558

GRAVY (calculated)

-0.542

Length

392 amino acids

Sequence
(BLAST)

001: MDIAEEAVAG TAAQGDLAEV VARAGAMAMA AAPSHHRRPP SPSPAAADHS HVMSRAAGQI MAIPPACYDE EQELRPAAAC GDAVMFDVPS SMVVDPYHQL
101: SSSAATAPPH GHGGYWLPPQ QISQQACYGL DVAMGGAAAA DADGDEPMMM RISPVTPPPP SHHQIMKSRK NEVKKVVCIP ALPPASSRPG GGEVIPSDLW
201: AWRKYGQKPI KGSPYPRGYY RCSSSKGCMA RKQVERSRSD PNMLVITYTA EHNHPWPMQR NVLAGYSRPH THMSNCKKKN SCRVEPTSSW PTSSSSSSSS
301: KNANYFEHNV VPSSNIECQQ MTNMMEDNAA GYVAYAIDTL DEEGVAMHQP INRNSIQPSD EVFAELEELE PSNNPVNANI YSRGVSYEWQ KF

Best Arabidopsis Sequence Match ( AT1G30650.1 )
(BLAST)

001: MCSVSELLDM ENFQGDLTDV VRGIGGHVLS PETPPSNIWP LPLSHPTPSP SDLNINPFGD PFVSMDDPLL QELNSITNSG YFSTVGDNNN NIHNNNGFLV
101: PKVFEEDHIK SQCSIFPRIR ISHSNIIHDS SPCNSPAMSA HVVAAAAAAS PRGIINVDTN SPRNCLLVDG TTFSSQIQIS SPRNLGLKRR KSQAKKVVCI
201: PAPAAMNSRS SGEVVPSDLW AWRKYGQKPI KGSPFPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPIQR NALAGSTRSS TSSSSNPNPS
301: KPSTANVNSS SIGSQNTIYL PSSTTPPPTL SSSAIKDERG DDMELENVDD DDDNQIAPYR PELHDHQHQP DDFFADLEEL EGDSLSMLLS HGCGGDGKDK
401: TTASDGISNF FGWSGDNNYN NYDDQDSRSL

Arabidopsis Description

WRKY14Probable WRKY transcription factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.