CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027527.1-P	Field mustard	cytosol	98.87	98.69
CDY36971	Canola	cytosol	97.37	97.74
AT5G44090.2	Thale cress	endoplasmic reticulum, extracellular	85.71	79.58
GSMUA_Achr8P19010_001	Banana	cytosol	48.87	79.27
CDY15483	Canola	cytosol	79.14	78.84
CDY71370	Canola	extracellular	35.53	78.75
CDX86655	Canola	cytosol	77.63	78.37
VIT_07s0005g03730.t01	Wine grape	cytosol	74.44	72.39
KRH62662	Soybean	cytosol	7.14	71.7
GSMUA_Achr11P...	Banana	cytosol	71.05	69.87
EER94083	Sorghum	cytosol	70.11	68.95
Zm00001d032708_P009	Maize	cytosol	69.92	68.89
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	69.92	68.76
HORVU1Hr1G040980.1	Barley	cytosol	69.92	68.76
GSMUA_AchrUn_...	Banana	cytosol	69.92	68.63
TraesCS1A01G153900.1	Wheat	cytosol	69.74	68.58
TraesCS1D01G152300.1	Wheat	cytosol	69.55	68.39
TraesCS1B01G171200.1	Wheat	cytosol	69.36	68.21
CDY48668	Canola	cytosol	67.67	66.91
CDX86212	Canola	cytosol	67.67	66.91
CDY44814	Canola	cytosol	67.11	66.11
CDY57012	Canola	cytosol	65.04	64.43
Zm00001d014037_P004	Maize	cytosol	69.36	64.29
CDY00020	Canola	cytosol	65.23	64.14
CDY13902	Canola	cytosol	17.29	20.58
CDX70827	Canola	nucleus	17.86	20.17
CDX92599	Canola	nucleus	18.05	20.0
CDY58103	Canola	nucleus	18.05	19.92
CDY02615	Canola	nucleus	17.86	19.71
CDX88930	Canola	nucleus	18.05	19.59

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.238.220	Gene3D:1.10.238.230	MapMan:18.4.24.1.2.4	GO:A0A078FJH0	UniProt:A0A078FJH0
EnsemblPlants:CDY13127	ProteinID:CDY13127	ProteinID:CDY13127.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00070983001	InterPro:IPR002048	PFAM:PF13499
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR14095	PANTHER:PTHR14095:SF7	SUPFAM:SSF47473	UniParc:UPI0004EDB38E

Description

BnaA09g16900DBnaA09g16900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJH0]

Coordinates

chrLK032031:+:747233..751469

Molecular Weight (calculated)

61803.7 Da

IEP (calculated)

4.743

GRAVY (calculated)

-0.338

Length

532 amino acids

Sequence
(BLAST)

001: MDIEEVHVLD PELLQLPGLS VKSNPLIAEE LFSHWLSLPD TSRLVKSLIE DTKSSTPVSI SKNCANLNIA CGSALPSLFL NSGTPPLSPR ASSGSPRFSR
101: QKTSPFSLQS PLRSVREPKP QLIPQFYFQH GPPPAKELKE QCLSMVDHLF SDFIDGLRMN EFKTVTKEVC KLPSFLSSVL FRKIDVDSTG IVTRDAFIKY
201: WVDGHMLAMD LASQIYNILR QPGCEYLRQA DFKPVLDELL TTHPGLEFLR NTPEFQERYA ETVIYRIFYY INRSGTGCIT LRELKRGNLV AAMQQVDEED
301: DINKVIRYFS YEHFYVIYCR FWELDGDHDF LIDKENLLKY GNHALTYRIV DRIFSQVPRK FTSKVEGKMS YEDFAYFILA EEDKSSEPSL EYWFKCIDLD
401: GDGVISPNEM QFFYEEQLHR MECITQEPVL FEDILCQIFD MIKPEARENC ITLKDLKASK LSRNVFNILF NLNKFMAFET RDPFLIRQER ENPTLTEWDR
501: FAQREYVRLS MEEDEVSNGS ADVWDEPLES PF

Best Arabidopsis Sequence Match ( AT5G44090.1 )
(BLAST)

001: MEIDGGNDVQ ILDPELLQLP GLSPVSLKEN PHIAEELFSQ WLSLPETGRL VKSLIDDTKS STPVSVSKNC TSLNVACGSA LPSVFLNSGT PPLSPRGSPG
101: SPRFSRQKTS PSLQSPLKSV REPKRQLIPQ FYFQHGRPPA KELREQCISM VDQFFSNYID GLHMDEFKSI TKEVCKLPSF LSSVLFRKID TSGTGIVTRD
201: AFIKYWVDGH MLAMDVASQI YNILRQPGCK YLRQADFKPV LDELLTTHPG LEFLRNTPEF QERYAETVIY RIFYYINRSG TGCITLRELK RGNLITAMQQ
301: VDEEDDINKV IRYFSYEHFY VIYCRFWELD GDHDFLIDKE NLIKYGNHAL TYRIVDRIFS QVPRKFTSKV EGKMSYEDFA YFILAEEDKS SEPSLEYWFK
401: CIDLDGDGVI TPNEMQFFYE EQLHRMECIT QEPVLFEDIL CQIFDMIKPE KENCITLQDL KASKLSGNIF NILFNLNKFM AFETRDPFLI RQERENPTLT
501: EWDRFAQREY VRLSMEEDVE EVSNGSADVW DEPLESPF

Arabidopsis Description

Calcium-binding EF-hand family protein [Source:TAIR;Acc:AT5G44090]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.