CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023463.1-P	Field mustard	cytosol	100.0	94.91
CDY37504	Canola	cytosol	20.31	69.74
CDY09851	Canola	plastid	89.27	62.97
CDX91066	Canola	plastid	78.16	62.2
AT5G14390.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	87.74	62.06
CDX69584	Canola	endoplasmic reticulum	87.74	61.89
CDY31930	Canola	cytosol	14.56	59.38
CDY11031	Canola	cytosol, plastid	50.96	55.65
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	70.5	50.97
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	70.5	50.97
CDY32850	Canola	cytosol	67.05	50.87
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	71.65	50.82
KRG93968	Soybean	cytosol	70.88	50.41
KRH07089	Soybean	cytosol	70.88	50.27
KRH58237	Soybean	cytosol	69.73	49.59
Solyc02g067920.2.1	Tomato	cytosol	70.11	49.46
PGSC0003DMT400017818	Potato	cytosol	68.97	48.52
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	57.47	45.87
CDY03421	Canola	cytosol	62.84	45.68
CDY34308	Canola	cytosol	63.6	45.36
CDY46139	Canola	cytosol	43.68	45.24
GSMUA_Achr9P02010_001	Banana	plastid	63.6	45.23
GSMUA_Achr3P17130_001	Banana	plastid	62.45	44.41
GSMUA_Achr8P28640_001	Banana	plastid	62.07	44.14
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	60.92	43.32
CDY45906	Canola	cytosol	35.63	41.7
GSMUA_Achr9P07620_001	Banana	plastid	58.62	41.58
Zm00001d030601_P001	Maize	plastid	58.24	41.42
Os12t0286600-01	Rice	cytosol, plastid	59.77	41.38
CDY20302	Canola	cytosol	41.0	40.53
CDY51485	Canola	cytosol	44.83	39.8
CDY34778	Canola	cytosol	44.44	39.46
CDX72285	Canola	cytosol	44.44	39.46
CDY55247	Canola	cytosol	44.44	39.46
CDY13406	Canola	cytosol	44.44	39.46
CDX85290	Canola	cytosol, nucleus, plastid	57.47	39.27
CDX86348	Canola	cytosol, nucleus, plastid	57.47	39.27
CDX68717	Canola	cytosol	44.06	39.12
CDY28238	Canola	cytosol	44.06	39.12
CDY23273	Canola	cytosol	43.68	38.78
CDY51065	Canola	plastid	50.96	38.66
CDY20301	Canola	cytosol	43.68	38.64
CDY27016	Canola	plastid	50.57	38.6
CDY35777	Canola	cytosol	55.56	38.46
CDX92650	Canola	cytosol	62.07	37.33
CDX98113	Canola	plastid	51.72	37.09
CDY56180	Canola	plastid	51.34	36.91
CDX77081	Canola	plastid	27.59	34.12
CDY35552	Canola	plastid	39.85	29.8
CDY12257	Canola	plastid	38.7	24.57
CDY22593	Canola	plastid	38.31	24.33
CDY53272	Canola	plastid	14.56	24.2
CDY43012	Canola	plastid	39.85	24.13
CDY37505	Canola	cytosol, extracellular	3.07	11.94

Protein Annotations

EnsemblPlants:CDX85599	EnsemblPlantsGene:GSBRNA2T00143323001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:AB_hydrolase	InterPro:Dienelactn_hydro	InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF01738
ProteinID:CDX85599	ProteinID:CDX85599.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0004EE6CC2	MapMan:35.2

Description

BnaA02g02140D

Coordinates

chrLK031842:+:833457..835232

Molecular Weight (calculated)

30223.1 Da

IEP (calculated)

8.937

GRAVY (calculated)

-0.698

Length

261 amino acids

Sequence
(BLAST)

001: MFCFSVFFLQ PSESHTYADI KAAYKCLEET YGTKQEDVIL YGQSVGSGPT LDLAARLPQL RAVVLHSPIL SGLRVMYPVK KTYWFDIYKN IDKITLVNCP
101: VLVIHGTSDE VVDCSHGKQL WELSKEKYEP LWLEGGSHCD LEHYPEYIKH LKKFITTVER RLSSRASACL SENQGSEVEM PRQSVDRIEK PPRESVDRRE
201: KEKPPKGPSK KSKLRITFEQ HLDRSRRSVD LHDKARKSVD QHHQIERGRK SVDRLDRVRS E

Best Arabidopsis Sequence Match ( AT3G01690.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9S7U7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.