Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53272 | Canola | plastid | 96.88 | 39.49 |
| KRG99188 | Soybean | extracellular | 51.56 | 31.43 |
| CDX77081 | Canola | plastid | 57.81 | 17.54 |
| CDY03421 | Canola | cytosol | 87.5 | 15.6 |
| CDY34308 | Canola | cytosol | 87.5 | 15.3 |
| CDY46139 | Canola | cytosol | 57.81 | 14.68 |
| CDX85599 | Canola | cytosol | 59.38 | 14.56 |
| CDX91066 | Canola | plastid | 71.88 | 14.02 |
| CDY20302 | Canola | cytosol | 57.81 | 14.02 |
| GSMUA_Achr8P28640_001 | Banana | plastid | 79.69 | 13.9 |
| OQU79022 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 78.12 | 13.62 |
| GSMUA_Achr9P02010_001 | Banana | plastid | 78.12 | 13.62 |
| GSMUA_Achr3P17130_001 | Banana | plastid | 78.12 | 13.62 |
| Zm00001d030601_P001 | Maize | plastid | 76.56 | 13.35 |
| CDX72285 | Canola | cytosol | 60.94 | 13.27 |
| CDY13406 | Canola | cytosol | 60.94 | 13.27 |
| Os12t0286600-01 | Rice | cytosol, plastid | 78.12 | 13.26 |
| KRH57170 | Soybean | plastid | 76.56 | 13.21 |
| KRH03885 | Soybean | cytosol, plastid | 76.56 | 13.21 |
| GSMUA_Achr9P07620_001 | Banana | plastid | 75.0 | 13.04 |
| CDX69584 | Canola | endoplasmic reticulum | 75.0 | 12.97 |
| CDY09851 | Canola | plastid | 75.0 | 12.97 |
| CDX68717 | Canola | cytosol | 59.38 | 12.93 |
| CDY28238 | Canola | cytosol | 59.38 | 12.93 |
| CDY51485 | Canola | cytosol | 59.38 | 12.93 |
| CDY23273 | Canola | cytosol | 57.81 | 12.59 |
| CDY55247 | Canola | cytosol | 57.81 | 12.59 |
| CDY20301 | Canola | cytosol | 57.81 | 12.54 |
| GSMUA_Achr9P22710_001 | Banana | endoplasmic reticulum, golgi | 64.06 | 12.54 |
| CDY34778 | Canola | cytosol | 56.25 | 12.24 |
| CDX92650 | Canola | cytosol | 82.81 | 12.21 |
| CDY32850 | Canola | cytosol | 65.62 | 12.21 |
| CDY28668 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 65.62 | 11.63 |
| CDY28862 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 65.62 | 11.63 |
| CDX98113 | Canola | plastid | 64.06 | 11.26 |
| CDX86348 | Canola | cytosol, nucleus, plastid | 67.19 | 11.26 |
| CDX85290 | Canola | cytosol, nucleus, plastid | 67.19 | 11.26 |
| CDY35777 | Canola | cytosol | 65.62 | 11.14 |
| CDY56180 | Canola | plastid | 62.5 | 11.02 |
| CDY35552 | Canola | plastid | 59.38 | 10.89 |
| CDY27016 | Canola | plastid | 57.81 | 10.82 |
| CDY51065 | Canola | plastid | 57.81 | 10.76 |
| CDY37505 | Canola | cytosol, extracellular | 10.94 | 10.45 |
| CDY22593 | Canola | plastid | 57.81 | 9.0 |
| CDY12257 | Canola | plastid | 57.81 | 9.0 |
| CDY43012 | Canola | plastid | 59.38 | 8.82 |
| CDY11031 | Canola | cytosol, plastid | 14.06 | 3.77 |
| CDY45906 | Canola | cytosol | 4.69 | 1.35 |
| KRG94364 | Soybean | cytosol | 1.56 | 0.72 |
| CDY37504 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY31930 | EnsemblPlantsGene:GSBRNA2T00050703001 | ncoils:Coil | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | ProteinID:CDY31930 |
| ProteinID:CDY31930.1 | UniParc:UPI0004EECB08 | UniProt:A0A078GZQ2 | MapMan:35.2 | : | : |
Description
BnaC09g28140DBnaC09g28140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZQ2]
Coordinates
chrLK032282:+:450645..452691
Molecular Weight (calculated)
7048.2 Da
IEP (calculated)
4.902
GRAVY (calculated)
-0.613
Length
64 amino acids
Sequence
(BLAST)
(BLAST)
1: MKRYGQSSGK PSEQNTYADI EAAYKCLEEN YGAKQENIIL YQSIGSGPTV DLAARLLRSA GDLY
001: MGGVTSSMAA KLAFFPPNPP SYKLVRDETT ELFLMSPFPH RENVDILRLP TRRGTEIVAM YIRYPMAVTT LLYSHGNAAD IGQMYELFIE LSIHLRVNLM
101: GYDYSGYGQS SGKPTEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKITLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGC EQPPRHSVDA PRKSKDGREK
301: PRKSIDRLRF QGYKLSHIEK PEKLKVPFEE MERSRRSVDI YRDKSQPMER ARKSVDWLDR SRATE
101: GYDYSGYGQS SGKPTEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKITLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGC EQPPRHSVDA PRKSKDGREK
301: PRKSIDRLRF QGYKLSHIEK PEKLKVPFEE MERSRRSVDI YRDKSQPMER ARKSVDWLDR SRATE
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB70]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.