Factsheet for GSMUA_Achr1P06250_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	52.23	92.15
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	88.72	87.68
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	67.66	82.31
VIT_02s0012g02180.t01	Wine grape	mitochondrion, vacuole	48.07	78.64
TraesCS7D01G294200.1	Wheat	plastid	78.04	76.01
TraesCS7A01G298400.1	Wheat	plastid	78.04	76.01
TraesCS7B01G188600.1	Wheat	plastid	78.04	75.79
EES14598	Sorghum	plastid	77.45	71.31
Os08t0161500-01	Rice	plasma membrane	78.34	67.87
CDY35552	Canola	plastid	67.95	65.62
PGSC0003DMT400006166	Potato	plasma membrane, plastid	73.0	63.08
Solyc08g076350.2.1	Tomato	plastid	72.7	62.82
GSMUA_Achr5P04500_001	Banana	cytosol	53.41	61.02
GSMUA_Achr9P13240_001	Banana	cytosol	52.52	60.0
KRH74343	Soybean	extracellular	72.4	59.95
KRH39591	Soybean	extracellular, mitochondrion, nucleus	71.81	59.31
GSMUA_Achr3P04580_001	Banana	cytosol	51.63	58.98
GSMUA_Achr11P...	Banana	cytosol	51.04	58.31
Zm00001d024530_P001	Maize	cytosol	73.29	58.25
Bra023247.1-P	Field mustard	plastid	68.55	56.2
CDY22593	Canola	plastid	68.55	56.2
CDY12257	Canola	plastid	68.55	56.2
GSMUA_Achr9P22720_001	Banana	plastid	16.91	55.88
Bra033847.1-P	Field mustard	plastid	69.44	54.42
AT1G32190.1	Thale cress	plastid	67.95	54.27
CDY43012	Canola	plastid	68.84	53.83
HORVU7Hr1G070080.3	Barley	plastid	55.49	53.58
GSMUA_Achr10P...	Banana	plastid	53.71	51.13
GSMUA_Achr8P17940_001	Banana	plastid	50.74	49.85
GSMUA_Achr3P17130_001	Banana	plastid	50.45	46.32
GSMUA_Achr9P02010_001	Banana	plastid	49.85	45.78
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	52.23	45.71
GSMUA_Achr9P07620_001	Banana	plastid	48.66	44.57
GSMUA_Achr8P28640_001	Banana	plastid	48.07	44.14
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	37.98	39.14

Protein Annotations

EnsemblPlants:GSMUA_Achr1P06250_001	EnsemblPlants:GSMUA_Achr1T06250_001	EnsemblPlantsGene:GSMUA_Achr1G06250_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF45	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002953C30	UniProt:M0RXI3	MapMan:35.2	:	:	:

Description

Putative Abhydrolase domain-containing protein FAM108C1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G06250_001]

Coordinates

chr1:-:5027251..5037056

Molecular Weight (calculated)

37727.7 Da

IEP (calculated)

8.473

GRAVY (calculated)

-0.110

Length

337 amino acids

Sequence
(BLAST)

001: MFSGCSVSSL AAKFTFFPPD PPTYSVKKDD SGRLVASGVP RDHSMDVLLL DTKHGTKLVA FYLKNPCARL TVLYSHGNAA DLGQLYDLFV QLKVNLRVNL
101: MGYDYSGYGA STGKPSEYNT YADIEAVYQC LQTEYGVGQE DLILYGQSVG SGPTLHLAAH LPRLRGVVLH SAILSGLRVV CHVKFSFCFD IYKNIDKIKK
201: VKCPVFVIHG TEDDVVNWLH GHGLWKLAEE PYDPLWIKGG GHCNLELYPD YIRHLCKFIQ EMENLTTATR LKKIRQTLKL PAKAVATTST TTFTTNCCCQ
301: IRCRKPNCWS CPRRGCLMVR CSKGSAYLCN WCCGDWH

Best Arabidopsis Sequence Match ( AT1G32190.1 )
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHLTKTPDG KLSAVSSASS SSSTFPSAGD PSLDVKVVKT RRGNKVTAFY LRNPNARLTL LYSHGNAADL GQLFDLFVQL
101: KVNLRVNLMG YDYSGYGAST GKPSEYDTYA DIEAAYECLQ TDYGVGQEDL ILYGQSVGSG PTLHLASKLP RLRGVVLHSG ILSGLRVLCH VKFKFCCDIY
201: SNVNKIKKVK CPVLVIHGTE DDVVNWLHGN RLWKMAKEPY EPLWIKGGGH CNLEIYPDYI RHLYRFIQDM ENTTTKSRLK TIWQEIRRRD ESTGCCCSGL
301: CRPSCSCPKP RCPKPSCSCG CGCGDCGCFK CSCPTLKGCF SCCKKPSCVS SCCCPTFKCS SCFGKPKCPK CSCWKCLKCP DTECCRSSCC CSGCFSWLCC
401: CGGGRRKEGE RRGSTTLEKS EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.