Factsheet for GSMUA_Achr5P04500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P13240_001	Banana	cytosol	90.51	90.51
GSMUA_Achr11P...	Banana	cytosol	89.49	89.49
GSMUA_Achr3P04580_001	Banana	cytosol	88.14	88.14
VIT_11s0149g00410.t01	Wine grape	cytosol	58.64	83.57
Os02t0796600-01	Rice	cytosol	71.86	80.3
KRH20089	Soybean	cytosol	79.66	80.2
TraesCS6A01G360000.1	Wheat	cytosol	74.24	79.35
HORVU6Hr1G085730.5	Barley	mitochondrion	67.46	79.28
TraesCS6B01G392900.1	Wheat	cytosol	74.24	78.78
TraesCS6D01G343000.1	Wheat	cytosol	74.24	78.78
KRH12940	Soybean	cytosol	78.98	78.45
Bra024028.1-P	Field mustard	cytosol	77.63	77.89
Bra011242.1-P	Field mustard	cytosol	77.29	77.55
CDY13406	Canola	cytosol	77.29	77.55
CDX68717	Canola	cytosol	76.95	77.21
CDY28238	Canola	cytosol	76.95	77.21
CDX72285	Canola	cytosol	76.61	76.87
AT4G31020.2	Thale cress	cytosol	76.27	76.53
CDY51485	Canola	cytosol	76.27	76.53
Bra010259.1-P	Field mustard	cytosol	75.59	75.85
CDY23273	Canola	cytosol	75.59	75.85
KXG31273	Sorghum	plastid	77.29	75.0
Solyc07g005130.2.1	Tomato	cytosol	74.92	74.92
PGSC0003DMT400008297	Potato	cytosol	74.92	74.92
VIT_11s0206g00050.t01	Wine grape	cytosol	60.34	74.17
CDY55247	Canola	cytosol	73.9	74.15
CDY20302	Canola	cytosol	66.1	73.86
Bra007861.1-P	Field mustard	cytosol	73.22	73.47
CDY34778	Canola	cytosol	73.22	73.47
Bra032105.1-P	Field mustard	cytosol	71.86	72.11
AT2G24320.2	Thale cress	cytosol	71.19	71.67
CDY20301	Canola	cytosol	71.53	71.53
CDY46139	Canola	cytosol	56.61	66.27
GSMUA_Achr1P06250_001	Banana	plastid	61.02	53.41
GSMUA_Achr9P22720_001	Banana	plastid	18.31	52.94
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	61.02	52.79
GSMUA_Achr8P17940_001	Banana	plastid	61.36	52.77
GSMUA_Achr10P...	Banana	plastid	58.98	49.15
GSMUA_Achr3P17130_001	Banana	plastid	60.0	48.23
GSMUA_Achr9P07620_001	Banana	plastid	58.98	47.28
GSMUA_Achr9P02010_001	Banana	plastid	58.64	47.14
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	43.39	46.21
GSMUA_Achr8P28640_001	Banana	plastid	57.29	46.05
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	60.0	45.97
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	27.46	42.41
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	43.05	38.84

Protein Annotations

EnsemblPlants:GSMUA_Achr5P04500_001	EnsemblPlants:GSMUA_Achr5T04500_001	EnsemblPlantsGene:GSMUA_Achr5G04500_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474
UniParc:UPI000295F47E	UniProt:M0SVM9	MapMan:35.2	:	:	:

Description

Putative Abhydrolase domain-containing protein FAM108C1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G04500_001]

Coordinates

chr5:-:3313969..3317435

Molecular Weight (calculated)

33418.3 Da

IEP (calculated)

9.481

GRAVY (calculated)

-0.194

Length

295 amino acids

Sequence
(BLAST)

001: MGNVTSSVAA RFAFFPPEPA TYEVFREGGA EGRLCLSGLS PERNVAVHLV ETKVGNRVVA TFWRHPLARF TLLYSHGNAA DLGQMLDLFF ELRAHLRVNI
101: MSYDYSGYGA STGKPSEFNT YYDIEAVYDC LKKEYGIKQE DLILYGQSVG SGPTLHLAAR LQKLRGVVLH SAILSGIRVL YPVKLTFWFD IFKNIDKIRQ
201: VNCPVLVIHG TADDIVDWTH GKRLWELSKE KYDPLWIKGG GHCNLESYPQ YIRHLRKFIN AMEKLSVAKQ TTQSSLPTST ITEVKHNKCL RFGKR

Best Arabidopsis Sequence Match ( AT4G31020.2 )
(BLAST)

001: MGNVTSNVAA KFAFFPPEPA TYGVTKDDET GKLVFAGVSA DKNVEVHQLT TKSGNKVVAT FWRHPFARFT LLYSHGNAAD LGQMVELFIE LRAHLRVNIM
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84JV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.