Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85290 | Canola | cytosol, nucleus, plastid | 86.22 | 90.05 |
| CDX86348 | Canola | cytosol, nucleus, plastid | 85.96 | 89.79 |
| Bra025415.1-P | Field mustard | cytosol, nucleus, plastid | 85.71 | 89.76 |
| Bra020738.1-P | Field mustard | cytosol, nucleus, plastid | 79.45 | 89.55 |
| CDY35777 | Canola | cytosol | 83.96 | 88.86 |
| CDY45906 | Canola | cytosol | 43.61 | 78.03 |
| KRG93729 | Soybean | cytosol | 67.42 | 71.16 |
| Solyc02g065700.2.1 | Tomato | cytosol | 49.87 | 70.82 |
| KRH18325 | Soybean | cytosol, nucleus, peroxisome | 66.67 | 70.37 |
| PGSC0003DMT400003495 | Potato | plastid | 65.66 | 69.5 |
| Solyc02g089320.2.1 | Tomato | plastid | 62.41 | 69.36 |
| KRH01428 | Soybean | plastid | 65.41 | 68.68 |
| PGSC0003DMT400068320 | Potato | cytosol | 48.37 | 68.68 |
| GSMUA_Achr9P22720_001 | Banana | plastid | 17.54 | 68.63 |
| KRH45145 | Soybean | plastid | 64.16 | 67.02 |
| AT1G66900.1 | Thale cress | cytosol | 44.61 | 65.44 |
| OQU76743 | Sorghum | cytosol, mitochondrion | 51.38 | 64.87 |
| GSMUA_Achr10P... | Banana | plastid | 57.14 | 64.41 |
| TraesCS7B01G293000.1 | Wheat | plastid | 60.65 | 63.19 |
| TraesCS7A01G391300.1 | Wheat | plastid | 60.65 | 63.19 |
| TraesCS7D01G386800.1 | Wheat | plastid | 60.4 | 62.92 |
| PGSC0003DMT400068318 | Potato | plastid | 17.79 | 62.83 |
| AT3G01690.1 | Thale cress | cytosol, plastid | 56.39 | 62.33 |
| AT4G31020.2 | Thale cress | cytosol | 45.36 | 61.56 |
| GSMUA_Achr3P28090_001 | Banana | cytosol, nucleus, plastid | 58.65 | 60.78 |
| AT2G24320.2 | Thale cress | cytosol | 44.61 | 60.75 |
| AT5G38220.1 | Thale cress | cytosol | 50.88 | 60.42 |
| AT4G24760.1 | Thale cress | cytosol, nucleus, plastid | 54.89 | 60.0 |
| Os02t0190800-01 | Rice | plasma membrane | 58.15 | 59.64 |
| HORVU7Hr1G092460.1 | Barley | plastid | 60.9 | 58.55 |
| AT5G14390.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 54.14 | 58.54 |
| EES06425 | Sorghum | plastid | 59.9 | 58.44 |
| TraesCS6B01G199000.1 | Wheat | plastid | 57.64 | 58.38 |
| TraesCS6D01G160600.1 | Wheat | plastid | 57.64 | 58.38 |
| TraesCS6A01G170900.1 | Wheat | plastid | 57.89 | 58.33 |
| VIT_14s0083g00800.t01 | Wine grape | plastid | 63.66 | 57.73 |
| HORVU6Hr1G034870.2 | Barley | plastid | 57.64 | 57.64 |
| Zm00001d046660_P001 | Maize | plastid | 60.15 | 57.01 |
| AT1G13610.1 | Thale cress | plastid | 51.13 | 56.98 |
| Zm00001d015656_P001 | Maize | plastid | 60.65 | 56.02 |
| Zm00001d053705_P001 | Maize | cytosol | 28.57 | 52.78 |
| TraesCS7D01G284300.3 | Wheat | cytosol | 53.63 | 52.2 |
| TraesCS7B01G196600.1 | Wheat | cytosol | 53.63 | 52.2 |
| KXG25721 | Sorghum | cytosol | 52.13 | 50.49 |
| Zm00001d052810_P001 | Maize | cytosol | 52.13 | 49.76 |
| HORVU7Hr1G061990.5 | Barley | cytosol, nucleus, plastid | 55.39 | 49.44 |
| Zm00001d012172_P001 | Maize | mitochondrion | 26.32 | 44.87 |
| AT1G32190.1 | Thale cress | plastid | 42.36 | 40.05 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:822739 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | ProteinID:AEE77637.1 |
| ArrayExpress:AT3G30380 | EnsemblPlantsGene:AT3G30380 | RefSeq:AT3G30380 | TAIR:AT3G30380 | RefSeq:AT3G30380-TAIR-G | EnsemblPlants:AT3G30380.1 |
| TAIR:AT3G30380.1 | Unigene:At.53597 | ProteinID:BAB02238.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0016787 | InterPro:IPR029058 | RefSeq:NP_189657.1 | PFAM:PF00561 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF124 | UniProt:Q9LI62 | MEROPS:S09.A32 |
| SUPFAM:SSF53474 | UniParc:UPI00000A8208 | SEG:seg | : | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
Coordinates
chr3:+:11974009..11976571
Molecular Weight (calculated)
45033.1 Da
IEP (calculated)
9.243
GRAVY (calculated)
-0.398
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRYISQSF YDVLMIMLLM IMYDNRFGEM IRSVGFCNID CFKPTATAK
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRYISQSF YDVLMIMLLM IMYDNRFGEM IRSVGFCNID CFKPTATAK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.