Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037774.1-P | Field mustard | cytosol | 93.38 | 93.38 |
| Bra034043.1-P | Field mustard | cytosol | 93.38 | 93.38 |
| Bra030401.1-P | Field mustard | cytosol | 93.38 | 93.38 |
| AT5G38220.1 | Thale cress | cytosol | 82.72 | 66.96 |
| VIT_14s0006g02620.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 82.72 | 65.79 |
| PGSC0003DMT400067845 | Potato | cytosol, plastid | 79.41 | 63.72 |
| Solyc02g086220.2.1 | Tomato | cytosol, plastid | 79.41 | 63.53 |
| PGSC0003DMT400006272 | Potato | plastid | 78.68 | 62.76 |
| Solyc03g034270.2.1 | Tomato | plastid | 78.31 | 62.65 |
| KRH18213 | Soybean | plastid | 77.94 | 60.06 |
| KRG93935 | Soybean | plastid | 76.47 | 58.76 |
| GSMUA_Achr8P17940_001 | Banana | plastid | 72.79 | 57.73 |
| AT4G31020.2 | Thale cress | cytosol | 61.4 | 56.8 |
| TraesCS3D01G262400.2 | Wheat | plastid | 72.79 | 55.0 |
| AT2G24320.2 | Thale cress | cytosol | 58.82 | 54.61 |
| TraesCS3B01G295700.1 | Wheat | plastid | 72.79 | 54.55 |
| HORVU3Hr1G064120.3 | Barley | plastid | 72.43 | 54.42 |
| Os01t0689800-01 | Rice | plastid | 72.79 | 54.4 |
| TraesCS3A01G262400.1 | Wheat | plastid | 72.43 | 54.12 |
| PGSC0003DMT400062645 | Potato | mitochondrion | 78.31 | 53.79 |
| EES01292 | Sorghum | plastid | 72.06 | 52.97 |
| Zm00001d011624_P001 | Maize | plastid | 71.32 | 52.43 |
| Zm00001d043801_P002 | Maize | plastid | 70.96 | 52.16 |
| AT3G01690.1 | Thale cress | cytosol, plastid | 68.38 | 51.52 |
| AT5G14390.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 68.01 | 50.14 |
| AT4G24760.1 | Thale cress | cytosol, nucleus, plastid | 66.54 | 49.59 |
| AT3G30380.1 | Thale cress | cytosol | 65.44 | 44.61 |
| AT1G13610.1 | Thale cress | plastid | 57.35 | 43.58 |
| AT1G32190.1 | Thale cress | plastid | 58.09 | 37.44 |
| Zm00001d042401_P001 | Maize | plastid | 48.16 | 27.07 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:843008 | UniProt:A0A178WF55 | InterPro:AB_hydrolase | ProteinID:AEE34569.1 |
| ArrayExpress:AT1G66900 | EnsemblPlantsGene:AT1G66900 | RefSeq:AT1G66900 | TAIR:AT1G66900 | RefSeq:AT1G66900-TAIR-G | EnsemblPlants:AT1G66900.1 |
| TAIR:AT1G66900.1 | EMBL:AY070046 | EMBL:AY117305 | Unigene:At.28422 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0016787 | InterPro:Hydrolase_4 | InterPro:IPR029058 | RefSeq:NP_176862.2 | ProteinID:OAP16043.1 |
| PFAM:PF12146 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 |
| UniProt:Q8VYT1 | MEROPS:S09.A34 | SUPFAM:SSF53474 | UniParc:UPI000009DF1B | SEG:seg | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYT1]
Coordinates
chr1:+:24959250..24961616
Molecular Weight (calculated)
30208.1 Da
IEP (calculated)
6.764
GRAVY (calculated)
-0.193
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVTSSIAA KFAFFPPTPP SYEVIADDSC GGRLYIPEIP RRDDVDILKL RTRCGNEIVA VYVKHSKANG TLLYSHGNAA DLGQMFELFV ELSNRLRVNL
101: MGYDYSGYGQ STGQASECNT YADIEASYKC LKEKYGVKDD QLIVYGQSVG SGPTVDLASR TPNLRGVVLQ CPILSGMRVL YPVKCTYWFD IYKNIDKIGS
201: VTCPVLVIHG TADEVVDWSH GKRLWELSKE KYEPLWISGG GHCDLELYPD FIRHLKKFVV SLGNKQAEQA PT
101: MGYDYSGYGQ STGQASECNT YADIEASYKC LKEKYGVKDD QLIVYGQSVG SGPTVDLASR TPNLRGVVLQ CPILSGMRVL YPVKCTYWFD IYKNIDKIGS
201: VTCPVLVIHG TADEVVDWSH GKRLWELSKE KYEPLWISGG GHCDLELYPD FIRHLKKFVV SLGNKQAEQA PT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.