Factsheet for Bra030401.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037774.1-P	Field mustard	cytosol	100.0	100.0
Bra034043.1-P	Field mustard	cytosol	100.0	100.0
AT1G66900.1	Thale cress	cytosol	93.38	93.38
Bra004197.1-P	Field mustard	cytosol	26.84	90.12
Bra014940.1-P	Field mustard	cytosol	26.84	90.12
VIT_14s0006g02620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	82.35	65.5
Bra028401.1-P	Field mustard	plastid	82.35	65.12
PGSC0003DMT400067845	Potato	cytosol, plastid	79.41	63.72
Solyc02g086220.2.1	Tomato	cytosol, plastid	79.04	63.24
PGSC0003DMT400006272	Potato	plastid	78.31	62.46
Solyc03g034270.2.1	Tomato	plastid	77.94	62.35
KRH18213	Soybean	plastid	77.21	59.49
KRG93935	Soybean	plastid	75.74	58.19
Bra024028.1-P	Field mustard	cytosol	60.66	56.12
Bra011242.1-P	Field mustard	cytosol	60.29	55.78
Bra007861.1-P	Field mustard	cytosol	60.29	55.78
Bra010259.1-P	Field mustard	cytosol	59.56	55.1
Bra040729.1-P	Field mustard	plastid	22.79	54.87
Bra032105.1-P	Field mustard	cytosol	58.82	54.42
PGSC0003DMT400062645	Potato	mitochondrion	77.94	53.54
Bra008761.1-P	Field mustard	endoplasmic reticulum	68.38	50.27
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	64.71	49.72
Bra013831.1-P	Field mustard	cytosol	65.81	48.91
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	64.71	46.19
Bra023463.1-P	Field mustard	cytosol	42.65	42.18
Bra019712.1-P	Field mustard	cytosol	38.6	39.18
Bra040701.1-P	Field mustard	plastid	46.32	38.77
Bra023247.1-P	Field mustard	plastid	55.88	36.98
Bra033847.1-P	Field mustard	plastid	56.62	35.81
Bra019211.1-P	Field mustard	nucleus	66.91	32.97

Protein Annotations

EnsemblPlants:Bra030401.1	EnsemblPlants:Bra030401.1-P	EnsemblPlantsGene:Bra030401	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002541AC7	UniProt:M4ENN1	MapMan:35.2	:	:	:

Description

AT1G66900 (E=4e-139) | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: hydrolase (TAIR:AT5G38220.3); Has 2819 Blast hits to 2817 proteins in 490 species: Archae - 0; Bacteria - 727; Metazoa - 524; Fungi - 119; Plants - 148; Viruses - 6; Other Eukaryotes - 1295 (source: NCBI BLink).

Coordinates

chrA05:+:10880366..10881616

Molecular Weight (calculated)

30081.0 Da

IEP (calculated)

7.425

GRAVY (calculated)

-0.138

Length

272 amino acids

Sequence
(BLAST)

001: MGGVTSSIAA KFAFFPPTPP SYEVVADESC GGRLYIPEIP RRDDVDILKL RTRCGNEIVA VYVKHSKANA TILYSHGNAA DVGQMFELFV ELSNRLRVNL
101: MGYDYSGYGQ STGQASESNT YADIEASYKC LKEKYGVKDD QLILYGQSVG SGPTVDLASR TPNLRGVVLQ CPILSGMRVL YPVKCTYWFD IYKNIDKIGS
201: VACPVLVIHG TADEIVDYSH GRRLWELSKE KYEPLWISGG GHCDLELYPD FIKHLKKFVA SLANKQAAKA AI

Best Arabidopsis Sequence Match ( AT1G66900.1 )
(BLAST)

001: MGGVTSSIAA KFAFFPPTPP SYEVIADDSC GGRLYIPEIP RRDDVDILKL RTRCGNEIVA VYVKHSKANG TLLYSHGNAA DLGQMFELFV ELSNRLRVNL
101: MGYDYSGYGQ STGQASECNT YADIEASYKC LKEKYGVKDD QLIVYGQSVG SGPTVDLASR TPNLRGVVLQ CPILSGMRVL YPVKCTYWFD IYKNIDKIGS
201: VTCPVLVIHG TADEVVDWSH GKRLWELSKE KYEPLWISGG GHCDLELYPD FIRHLKKFVV SLGNKQAEQA PT

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.