Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003495 | Potato | plastid | 95.82 | 91.25 |
| Solyc02g065700.2.1 | Tomato | cytosol | 65.46 | 83.63 |
| GSMUA_Achr9P22720_001 | Banana | plastid | 20.61 | 72.55 |
| Bra020738.1-P | Field mustard | cytosol, nucleus, plastid | 69.92 | 70.9 |
| Solyc02g067920.2.1 | Tomato | cytosol | 70.19 | 68.11 |
| KRH01428 | Soybean | plastid | 71.31 | 67.37 |
| KRG93729 | Soybean | cytosol | 70.47 | 66.93 |
| CDX86348 | Canola | cytosol, nucleus, plastid | 71.03 | 66.75 |
| KRH45145 | Soybean | plastid | 70.75 | 66.49 |
| Bra025415.1-P | Field mustard | cytosol, nucleus, plastid | 70.47 | 66.4 |
| KRH18325 | Soybean | cytosol, nucleus, peroxisome | 69.92 | 66.4 |
| CDY35777 | Canola | cytosol | 69.64 | 66.31 |
| Solyc03g111770.2.1 | Tomato | cytosol | 68.52 | 66.31 |
| CDX85290 | Canola | cytosol, nucleus, plastid | 70.47 | 66.23 |
| OQU76743 | Sorghum | cytosol, mitochondrion | 57.1 | 64.87 |
| GSMUA_Achr3P28090_001 | Banana | cytosol, nucleus, plastid | 68.52 | 63.9 |
| GSMUA_Achr10P... | Banana | plastid | 62.95 | 63.84 |
| TraesCS7B01G293000.1 | Wheat | plastid | 67.13 | 62.92 |
| TraesCS7D01G386800.1 | Wheat | plastid | 67.13 | 62.92 |
| TraesCS7A01G391300.1 | Wheat | plastid | 66.85 | 62.66 |
| AT3G30380.1 | Thale cress | cytosol | 69.36 | 62.41 |
| Solyc02g086220.2.1 | Tomato | cytosol, plastid | 57.1 | 60.29 |
| Os02t0190800-01 | Rice | plasma membrane | 65.18 | 60.15 |
| Solyc03g034270.2.1 | Tomato | plastid | 56.55 | 59.71 |
| TraesCS6B01G199000.1 | Wheat | plastid | 64.9 | 59.14 |
| TraesCS6A01G170900.1 | Wheat | plastid | 64.9 | 58.84 |
| TraesCS6D01G160600.1 | Wheat | plastid | 64.35 | 58.63 |
| VIT_14s0083g00800.t01 | Wine grape | plastid | 71.31 | 58.18 |
| HORVU6Hr1G034870.2 | Barley | plastid | 64.62 | 58.15 |
| HORVU7Hr1G092460.1 | Barley | plastid | 67.13 | 58.07 |
| Solyc07g005130.2.1 | Tomato | cytosol | 47.63 | 57.97 |
| EES06425 | Sorghum | plastid | 64.9 | 56.97 |
| Zm00001d046660_P001 | Maize | plastid | 65.46 | 55.82 |
| Zm00001d015656_P001 | Maize | plastid | 64.35 | 53.47 |
| KXG25721 | Sorghum | cytosol | 61.0 | 53.16 |
| TraesCS7D01G284300.3 | Wheat | cytosol | 60.45 | 52.93 |
| Solyc05g010680.1.1 | Tomato | cytosol | 56.27 | 52.74 |
| TraesCS7B01G196600.1 | Wheat | cytosol | 60.17 | 52.68 |
| Zm00001d052810_P001 | Maize | cytosol | 59.33 | 50.96 |
| CDY45906 | Canola | cytosol | 30.36 | 48.88 |
| HORVU7Hr1G061990.5 | Barley | cytosol, nucleus, plastid | 60.72 | 48.77 |
| Zm00001d012172_P001 | Maize | mitochondrion | 30.64 | 47.01 |
| Zm00001d053705_P001 | Maize | cytosol | 27.3 | 45.37 |
| Solyc08g076350.2.1 | Tomato | plastid | 46.8 | 43.08 |
Protein Annotations
| EnsemblPlants:Solyc02g089320.2.1 | EnsemblPlantsGene:Solyc02g089320.2 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 |
| PANTHER:PTHR12277 | PANTHER:PTHR12277:SF124 | PFAM:PF12146 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI0002768A8A |
| UniProt:K4BC84 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:51178522..51182343
Molecular Weight (calculated)
40227.9 Da
IEP (calculated)
8.619
GRAVY (calculated)
-0.442
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAVTSSMAA KFAFFPPNPP SYGVVVEEST GKLKLTEVAA KENVDVLKLP TKKGTEIVAV YIRNPAATLT VLYSHGNAAD LGQMYELFVE LSHLLRVNLM
101: GYDYSGYGRS TGKPSEQNTY ADIEAAYRCL EETYGVKEED VILYGQSVGS GPTLDLASRL SRLRAVVLHS PILSGLRVMY AVKRTYWFDI YKNIDKIPLV
201: ECPVLIIHGT ADDVVDCSHG KQLFELSKQK YEPLWVKTGN HCDLELFPEY IIHLKKFISA IEKSTSFRNV SALSINQIDK PRSSTDCRPR SSTDQREKSR
301: LSTEKREPRI STDQREKSRA SIDRKEKSSK SVDLSDKAND NTEQQEKARK SIDRLALAT
101: GYDYSGYGRS TGKPSEQNTY ADIEAAYRCL EETYGVKEED VILYGQSVGS GPTLDLASRL SRLRAVVLHS PILSGLRVMY AVKRTYWFDI YKNIDKIPLV
201: ECPVLIIHGT ADDVVDCSHG KQLFELSKQK YEPLWVKTGN HCDLELFPEY IIHLKKFISA IEKSTSFRNV SALSINQIDK PRSSTDCRPR SSTDQREKSR
301: LSTEKREPRI STDQREKSRA SIDRKEKSSK SVDLSDKAND NTEQQEKARK SIDRLALAT
001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.