Factsheet for GSMUA_Achr3P15720_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P08270_001
GSMUA_Achr4P10230_001
GSMUA_Achr4P15460_001
GSMUA_Achr6P14800_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31490.1	GSMUA_Achr4P08270_001	AT3G16310.1	21798944
AT2G31490.1	GSMUA_Achr4P15460_001	AT3G16310.1	21798944
AT2G31490.1	GSMUA_Achr6P14800_001	AT3G16310.1	21798944
AT2G31490.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G325200.1	Wheat	cytosol	87.32	87.32
TraesCS3A01G290400.1	Wheat	cytosol	87.32	87.32
TraesCS3D01G290200.1	Wheat	cytosol	87.32	87.32
Os01t0750800-02	Rice	cytosol	85.92	85.92
EES03615	Sorghum	cytosol	85.92	85.92
EES01418	Sorghum	cytosol	84.51	84.51
CDY15390	Canola	cytosol	83.1	83.1
CDY19085	Canola	cytosol	83.1	83.1
CDY23940	Canola	cytosol	83.1	83.1
CDY34488	Canola	cytosol	83.1	83.1
AT2G31490.1	Thale cress	cytosol	83.1	83.1
VIT_12s0055g00700.t01	Wine grape	cytosol	83.1	83.1
CDY10807	Canola	cytosol	83.1	83.1
CDX84783	Canola	cytosol	83.1	83.1
Bra018237.1-P	Field mustard	cytosol	83.1	83.1
CDY10808	Canola	cytosol	81.69	81.69
Zm00001d012741_P001	Maize	cytosol	84.51	80.0
Solyc05g046390.2.1	Tomato	plastid	66.2	73.44
Os01t0732100-00	Rice	mitochondrion	84.51	70.59
Bra022843.1-P	Field mustard	cytosol	66.2	69.12
KRH49068	Soybean	cytosol	67.61	64.0
HORVU3Hr1G071870.1	Barley	cytosol, golgi, plasma membrane	87.32	61.39
Solyc09g059220.1.1	Tomato	cytosol	54.93	52.7
Zm00001d012742_P001	Maize	cytosol	71.83	37.23
Zm00001d012469_P001	Maize	cytosol	69.01	35.77
OQU91338	Sorghum	plastid	56.34	32.52

Protein Annotations

EnsemblPlants:GSMUA_Achr3P15720_001	EnsemblPlants:GSMUA_Achr3T15720_001	EnsemblPlantsGene:GSMUA_Achr3G15720_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0016020	GO:GO:0016021	GO:GO:0031966
GO:GO:0045271	PANTHER:PTHR35479	PANTHER:PTHR35479:SF3	TMHMM:TMhelix	UniParc:UPI00029629C7	UniProt:M0SEY8
MapMan:35.2	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G15720_001]

Coordinates

chr3:-:16766082..16766869

Molecular Weight (calculated)

8293.1 Da

IEP (calculated)

9.807

GRAVY (calculated)

-0.307

Length

71 amino acids

Sequence
(BLAST)

1: MGGGMEVNKN KYIEDWNAAR ENLELNFRWT RRNLALIGIF GLAVPILVYK GIVREFHMQD EDAGRPLRKF L

Best Arabidopsis Sequence Match ( AT2G31490.1 )
(BLAST)

1: MGGGMETNKN KFIEDWGSAR ENLEHNFRWT RRNFALIGIF GIALPIIVYK GIVKDFHMQD EDAGRPHRKF L

Arabidopsis Description

AT2G31490 protein [Source:UniProtKB/TrEMBL;Acc:Q9SIQ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.