Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- golgi 1
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G290200.1 | Wheat | cytosol | 70.3 | 100.0 |
| TraesCS3B01G325200.1 | Wheat | cytosol | 70.3 | 100.0 |
| TraesCS3A01G290400.1 | Wheat | cytosol | 70.3 | 100.0 |
| EES03615 | Sorghum | cytosol | 67.33 | 95.77 |
| Os01t0750800-02 | Rice | cytosol | 65.35 | 92.96 |
| Zm00001d012741_P001 | Maize | cytosol | 68.32 | 92.0 |
| GSMUA_Achr3P15720_001 | Banana | cytosol | 61.39 | 87.32 |
| VIT_12s0055g00700.t01 | Wine grape | cytosol | 53.47 | 76.06 |
| CDY15390 | Canola | cytosol | 51.49 | 73.24 |
| CDY19085 | Canola | cytosol | 51.49 | 73.24 |
| CDY23940 | Canola | cytosol | 51.49 | 73.24 |
| CDY34488 | Canola | cytosol | 51.49 | 73.24 |
| CDY10807 | Canola | cytosol | 51.49 | 73.24 |
| CDX84783 | Canola | cytosol | 51.49 | 73.24 |
| Bra018237.1-P | Field mustard | cytosol | 51.49 | 73.24 |
| AT2G31490.1 | Thale cress | cytosol | 51.49 | 73.24 |
| CDY10808 | Canola | cytosol | 50.49 | 71.83 |
| Solyc05g046390.2.1 | Tomato | plastid | 43.56 | 68.75 |
| Bra022843.1-P | Field mustard | cytosol | 39.6 | 58.82 |
| KRH49068 | Soybean | cytosol | 40.59 | 54.67 |
| Solyc09g059220.1.1 | Tomato | cytosol | 37.62 | 51.35 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G071870.1 | EnsemblPlantsGene:HORVU3Hr1G071870 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005747 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0031966 | GO:GO:0045271 |
| PANTHER:PTHR35479 | PANTHER:PTHR35479:SF3 | TMHMM:TMhelix | UniParc:UPI000B48555D | UniProt:A0A287LLE1 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr3H:-:543136922..543137952
Molecular Weight (calculated)
11911.5 Da
IEP (calculated)
9.876
GRAVY (calculated)
-0.172
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGMEVNKN RWIEEWNAGR ENLELNFRFT RRSLAVIGLF GLAVPILVYK GIVREFVRSR PISAHISFSL LQTLNQIWAC WLEWMQHMQD EDAGRPYRKF
101: L
101: L
1: MGGGMETNKN KFIEDWGSAR ENLEHNFRWT RRNFALIGIF GIALPIIVYK GIVKDFHMQD EDAGRPHRKF L
Arabidopsis Description
AT2G31490 protein [Source:UniProtKB/TrEMBL;Acc:Q9SIQ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.