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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • nucleus 3
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, plastid
iPSORT:plastid
MultiLoc:nucleus
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G002680.2
HORVU0Hr1G015930.1
HORVU1Hr1G028210.2
HORVU1Hr1G069080.4
HORVU2Hr1G006030.4
HORVU2Hr1G086900.2
HORVU2Hr1G118680.7
HORVU3Hr1G018080.2
HORVU4Hr1G011970.1
HORVU4Hr1G023890.1
HORVU4Hr1G043650.2
HORVU4Hr1G080140.1
HORVU5Hr1G016680.2
HORVU5Hr1G105780.5
HORVU5Hr1G105820.1
HORVU6Hr1G008670.1
HORVU6Hr1G011180.1
HORVU6Hr1G056080.4
HORVU6Hr1G068400.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01010.1 HORVU0Hr1G015930.1 AT1G10030.1 21798944
AT1G01010.1 HORVU1Hr1G028210.2 AT1G10030.1 21798944
AT1G01010.1 HORVU2Hr1G086900.2 AT1G10030.1 21798944
AT1G01010.1 HORVU4Hr1G011970.1 AT1G10030.1 21798944
AT1G01010.1 HORVU6Hr1G056080.4 AT1G10030.1 21798944
AT1G01010.1 HORVU6Hr1G068400.2 AT1G10030.1 21798944
AT1G01010.1 HORVU4Hr1G023890.1 AT1G16240.1 21798944
AT1G01010.1 HORVU5Hr1G016680.2 AT1G16240.1 21798944
AT1G01010.1 HORVU6Hr1G011180.1 AT1G16240.1 21798944
AT1G01010.1 HORVU1Hr1G069080.4 AT1G77350.1 21798944
AT1G01010.1 HORVU2Hr1G118680.7 AT2G20740.1 21798944
AT1G01010.1 HORVU3Hr1G018080.2 AT2G32380.1 21798944
AT1G01010.1 HORVU5Hr1G105780.5 AT2G32380.1 21798944
AT1G01010.1 HORVU5Hr1G105820.1 AT2G32380.1 21798944
AT1G01010.1 HORVU6Hr1G008670.1 AT2G32380.1 21798944
AT1G01010.1 HORVU0Hr1G002680.2 AT3G07950.1 21798944
AT1G01010.1 HORVU2Hr1G006030.4 AT3G07950.1 21798944
AT1G01010.1 HORVU4Hr1G080140.1 AT5G43460.1 21798944
AT1G01010.1 HORVU4Hr1G043650.2 AT5G51010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G000200.1 Wheat plastid 64.72 61.14
TraesCS7A01G000300.1 Wheat nucleus 58.87 59.09
TraesCS4A01G499900.1 Wheat plastid 59.43 54.69
Os06t0101800-01 Rice nucleus 25.85 38.16
KRH06324 Soybean cytosol 17.36 34.46
CDX90132 Canola nucleus 7.17 30.89
Bra010895.1-P Field mustard nucleus 7.17 30.89
Zm00001d045617_P001 Maize nucleus, plasma membrane, vacuole 35.28 30.61
AT1G02210.1 Thale cress cytosol, nucleus, plastid 4.91 29.89
CDY15220 Canola nucleus 11.32 29.7
CDY11741 Canola nucleus 7.55 28.78
CDY15223 Canola nucleus 11.32 28.3
EER87676 Sorghum plastid 34.15 28.06
KRH47750 Soybean cytosol 16.23 27.92
CDY32450 Canola nucleus 11.13 26.34
CDX89994 Canola nucleus 12.45 26.29
Bra033299.1-P Field mustard nucleus 12.45 26.29
CDY59815 Canola cytosol 13.21 26.22
CDY32449 Canola nucleus 10.94 25.89
Bra032615.1-P Field mustard nucleus 10.94 25.89
Bra036328.1-P Field mustard nucleus 13.96 25.69
CDY07138 Canola nucleus 13.77 25.35
CDY55325 Canola nucleus 12.08 25.2
CDY15210 Canola cytosol, nucleus, plastid 12.08 24.71
CDY55326 Canola nucleus 11.13 24.38
Bra033302.1-P Field mustard nucleus 11.7 23.85
Bra027596.1-P Field mustard nucleus 10.75 23.55
Bra036326.1-P Field mustard nucleus 16.42 23.51
AT4G01520.1 Thale cress nucleus 13.4 23.51
CDY07135 Canola nucleus 16.42 23.45
AT3G04430.1 Thale cress nucleus 8.68 23.23
Bra033297.1-P Field mustard nucleus 9.81 23.11
KRH47748 Soybean cytosol 16.98 22.22
KRH06327 Soybean cytosol 16.42 21.75
AT1G02230.1 Thale cress nucleus 14.72 21.73
CDX89996 Canola nucleus 10.57 21.71
AT3G04420.1 Thale cress nucleus 13.96 21.64
CDY15214 Canola nucleus 12.08 21.62
CDX89991 Canola nucleus 10.94 21.56
KRH06326 Soybean nucleus 17.17 21.11
Bra033305.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 11.13 20.92
CDY15217 Canola nucleus 13.58 20.63
CDY59814 Canola cytosol 15.85 19.76
Bra036327.1-P Field mustard cytosol 15.85 19.76
KRH47747 Soybean nucleus 18.49 19.72
CDY07136 Canola cytosol 15.47 19.25
CDX89995 Canola nucleus 12.83 19.15
CDY59812 Canola cytosol 16.04 18.85
Bra033306.1-P Field mustard nucleus 13.58 18.75
AT1G02250.1 Thale cress nucleus 12.64 18.51
Bra033298.1-P Field mustard nucleus 13.02 18.45
Bra033308.1-P Field mustard nucleus 13.77 18.43
CDX89990 Canola nucleus 13.77 18.43
CDX97252 Canola cytosol 14.53 18.03
CDY15224 Canola cytosol 12.64 17.91
CDY01928 Canola cytosol, nucleus, vacuole 16.42 17.9
Bra033303.1-P Field mustard nucleus 12.83 17.71
AT1G02220.1 Thale cress nucleus 13.02 17.51
AT4G01550.1 Thale cress cytosol, golgi, nucleus 15.09 17.51
AT1G01010.1 Thale cress nucleus 14.15 17.48
Bra008553.1-P Field mustard cytosol, nucleus, plasma membrane 14.34 17.16
CDY15215 Canola nucleus 13.4 16.71
AT4G01540.1 Thale cress cytosol 14.53 16.28
CDX89993 Canola nucleus 14.34 16.27
Bra033300.1-P Field mustard nucleus 13.96 16.12
CDY15221 Canola cytosol, nucleus, peroxisome 12.83 16.0
CDY15212 Canola nucleus 12.64 15.76
CDY15225 Canola nucleus 11.51 15.29
CDY15218 Canola nucleus 9.62 13.97
CDX89999 Canola nucleus 12.45 13.89
Bra033296.1-P Field mustard nucleus 12.45 13.89
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150UniProt:A0A287VC57GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:HORVU7Hr1G000910EnsemblPlants:HORVU7Hr1G000910.1InterPro:IPR003441InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sf
PFAM:PF02365PFscan:PS51005PANTHER:PTHR31989PANTHER:PTHR31989:SF54SUPFAM:SSF101941UniParc:UPI000B462AA6
SEG:seg:::::
Description
No Description!
Coordinates
chrchr7H:+:1902022..1905214
Molecular Weight (calculated)
56648.1 Da
IEP (calculated)
4.566
GRAVY (calculated)
-0.557
Length
530 amino acids
Sequence
(BLAST)
001: MTTTAAAAGA ESSSSSASPS EAALPVGFRF RPTDEELVRH YLKAKIAGRA HPDLLAIPDV DLAAVEPWDL PARSVIKSDD PEWFFFARRD RPKYPGKSSR
101: SCRSTAAGYW KATGKDRLIR GPGPGGCRGK GALIGVKKTL VFHRGRAPRG ARTPWIMHEY TAVSADNPVH HSGSQSASAS ASASAAGPQN DSFVLYRLFN
201: KQDEETPAPV SEPPSMSSPA NLLLQADDDT ASASMVEDKA SPSDSSQLTP TNVTNDHSST AHLLPAAGAT EQTADQEAAY VATLAQLPDI EIQAEHQRYH
301: DEFPTFNSPM RPYTDLPFIG NMGDEHDLSM YLESIIAVGE QDAQDMLLHP AYDETGAGNA VSNPTSTTAA VPFWSAASSG SWTPCDLQDM GAAPWTQQQP
401: AGPAELMDPQ QGIAARRIRL AYAVERASAS QPILACHSES EEGEGESDCS TESSSSNHDE EEDHVNDVVF QTMAGDVMHN IPPGQALVVS AVEVAEKLQH
501: LSFNNNEEDG KPRGGGGDDL KQRLKQEDSG
Best Arabidopsis Sequence Match ( AT1G33060.1 )
(BLAST)
001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
Arabidopsis Description
NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.