Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036328.1-P | Field mustard | nucleus | 94.44 | 94.44 |
| CDY59815 | Canola | cytosol | 77.08 | 83.15 |
| CDY32450 | Canola | nucleus | 25.35 | 32.59 |
| CDY32449 | Canola | nucleus | 25.35 | 32.59 |
| CDY55326 | Canola | nucleus | 26.39 | 31.41 |
| CDY11741 | Canola | nucleus | 14.93 | 30.94 |
| CDX90132 | Canola | nucleus | 13.19 | 30.89 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 26.39 | 29.34 |
| CDY07135 | Canola | nucleus | 37.15 | 28.84 |
| CDY15223 | Canola | nucleus | 20.83 | 28.3 |
| CDY55325 | Canola | nucleus | 24.65 | 27.95 |
| CDY15220 | Canola | nucleus | 19.44 | 27.72 |
| CDX97252 | Canola | cytosol | 40.97 | 27.63 |
| KRH06324 | Soybean | cytosol | 25.35 | 27.34 |
| CDX89994 | Canola | nucleus | 23.26 | 26.69 |
| CDY59814 | Canola | cytosol | 38.54 | 26.12 |
| CDX89996 | Canola | nucleus | 23.26 | 25.97 |
| CDY07136 | Canola | cytosol | 38.19 | 25.82 |
| CDY15214 | Canola | nucleus | 26.39 | 25.68 |
| CDX89991 | Canola | nucleus | 23.26 | 24.91 |
| CDY59812 | Canola | cytosol | 37.5 | 23.95 |
| KRH47750 | Soybean | cytosol | 25.0 | 23.38 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 38.19 | 22.63 |
| CDX89995 | Canola | nucleus | 26.04 | 21.13 |
| Os06t0101800-01 | Rice | nucleus | 26.04 | 20.89 |
| CDY15218 | Canola | nucleus | 25.69 | 20.27 |
| CDY15224 | Canola | cytosol | 24.31 | 18.72 |
| CDY15215 | Canola | nucleus | 27.43 | 18.59 |
| CDY15212 | Canola | nucleus | 27.43 | 18.59 |
| KRH06327 | Soybean | cytosol | 25.69 | 18.5 |
| KRH06326 | Soybean | nucleus | 27.43 | 18.33 |
| CDX89999 | Canola | nucleus | 29.51 | 17.89 |
| CDX89990 | Canola | nucleus | 24.31 | 17.68 |
| KRH47747 | Soybean | nucleus | 30.21 | 17.5 |
| CDY15217 | Canola | nucleus | 21.18 | 17.48 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 25.0 | 16.94 |
| KRH47748 | Soybean | cytosol | 23.61 | 16.79 |
| CDY15225 | Canola | nucleus | 22.22 | 16.04 |
| CDX89993 | Canola | nucleus | 23.96 | 14.78 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 26.04 | 14.2 |
| TraesCS4A01G499900.1 | Wheat | plastid | 27.78 | 13.89 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 25.35 | 13.77 |
| TraesCS7D01G000200.1 | Wheat | plastid | 26.39 | 13.55 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 25.35 | 11.95 |
| EER87676 | Sorghum | plastid | 25.35 | 11.32 |
| CDY07137 | Canola | extracellular, plasma membrane | 8.68 | 7.96 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078F652 | EnsemblPlants:CDY07138 | ProteinID:CDY07138 | ProteinID:CDY07138.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00123489001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF109 | SUPFAM:SSF101941 | UniParc:UPI0004EBD6C4 | SEG:seg | : | : |
Description
BnaCnng01530D
Coordinates
chrLK031975:+:434262..436253
Molecular Weight (calculated)
32738.9 Da
IEP (calculated)
5.073
GRAVY (calculated)
-0.486
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: METSNVGFRF CPTDEELINY FLKNKILGKP WLVDDKIREV SICSYEPASL PALSMIKSKD PVWYFLSPKE YKSPKKSLTK RTTPSGFWKS TGKDRKVKEE
101: KRRDGIVIGI KKTLVYHEGK SSNAVPTPWI MHEYHITCLP LADQSTYVLC KLFYKGNVRD IPSGSNSTKP GHYLVMSDSN TVEATNTPPQ VEQAGQESLS
201: GFSVNDVIML MNEQEDLSPW DTLCPIPNTL FIDNNDNTKV QLQTTCLAQN DDEDLGAFTQ IESLLADHQE FITQENCEEY MLKWSCLL
101: KRRDGIVIGI KKTLVYHEGK SSNAVPTPWI MHEYHITCLP LADQSTYVLC KLFYKGNVRD IPSGSNSTKP GHYLVMSDSN TVEATNTPPQ VEQAGQESLS
201: GFSVNDVIML MNEQEDLSPW DTLCPIPNTL FIDNNDNTKV QLQTTCLAQN DDEDLGAFTQ IESLLADHQE FITQENCEEY MLKWSCLL
001: MMKDPTGYRF SPTGEEVINH YLKNKILGKT WLVDEAISEI NILNHKPSKD LPKLARIQSE DLEWYFFSPI EYTNPNKMKM KRTTGSGFWK PSGVDRKIRD
101: KRGNGVVIGI KKTLVYHEGK SPHGVRTPWV MHEYHITCLP HHKRKYVVCQ VKYKGEAAEI SYEPSPSLVS DSHTVIAING EPEPELQVEQ PGKENLLGMS
201: VDDLIEPMNQ QEEPQGPHLA PNDDEFIRGL RHVDREPVEY LFANEENMDG LSIMNDLTIP MIAQQEDLIL SEWEGFIAAT FFSDNNNNNN LNVHQLTSFL
301: PG
101: KRGNGVVIGI KKTLVYHEGK SPHGVRTPWV MHEYHITCLP HHKRKYVVCQ VKYKGEAAEI SYEPSPSLVS DSHTVIAING EPEPELQVEQ PGKENLLGMS
201: VDDLIEPMNQ QEEPQGPHLA PNDDEFIRGL RHVDREPVEY LFANEENMDG LSIMNDLTIP MIAQQEDLIL SEWEGFIAAT FFSDNNNNNN LNVHQLTSFL
301: PG
Arabidopsis Description
anac067F11O4.3 [Source:UniProtKB/TrEMBL;Acc:O82593]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.