CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, vacuole
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97252	Canola	cytosol	68.11	77.52
CDY07135	Canola	nucleus	35.19	46.09
AT4G01550.1	Thale cress	cytosol, golgi, nucleus	42.59	45.3
CDY59815	Canola	cytosol	24.28	44.19
CDY59814	Canola	cytosol	34.98	40.0
CDY07136	Canola	cytosol	34.77	39.67
CDY59812	Canola	cytosol	35.8	38.58
CDY07138	Canola	nucleus	22.63	38.19
CDY15220	Canola	nucleus	14.61	35.15
CDY55326	Canola	nucleus	16.67	33.47
CDY32450	Canola	nucleus	15.23	33.04
CDY15210	Canola	cytosol, nucleus, plastid	17.49	32.82
CDY32449	Canola	nucleus	15.02	32.59
CDX89994	Canola	nucleus	15.84	30.68
CDY15214	Canola	nucleus	18.52	30.41
CDY55325	Canola	nucleus	15.84	30.32
CDY15223	Canola	nucleus	12.76	29.25
CDY11741	Canola	nucleus	8.02	28.06
CDX90132	Canola	nucleus	7.0	27.64
KRH06324	Soybean	cytosol	15.02	27.34
KRH47750	Soybean	cytosol	16.26	25.65
CDX89991	Canola	nucleus	13.79	24.91
CDX89996	Canola	nucleus	13.17	24.81
CDX89995	Canola	nucleus	18.11	24.79
CDY15215	Canola	nucleus	21.4	24.47
CDY15218	Canola	nucleus	17.7	23.56
CDX89990	Canola	nucleus	19.14	23.48
CDY15212	Canola	nucleus	19.75	22.59
KRH06327	Soybean	cytosol	18.52	22.5
CDY15224	Canola	cytosol	17.08	22.19
CDX89999	Canola	nucleus	21.6	22.11
CDY15217	Canola	nucleus	15.64	21.78
KRH47748	Soybean	cytosol	18.11	21.73
Os06t0101800-01	Rice	nucleus	16.05	21.73
CDY15221	Canola	cytosol, nucleus, peroxisome	18.72	21.41
CDY15225	Canola	nucleus	17.49	21.3
KRH06326	Soybean	nucleus	18.52	20.88
CDX89993	Canola	nucleus	19.96	20.77
TraesCS7A01G000300.1	Wheat	nucleus	18.93	17.42
KRH47747	Soybean	nucleus	16.87	16.5
HORVU7Hr1G000910.1	Barley	nucleus	17.9	16.42
TraesCS7D01G000200.1	Wheat	plastid	18.52	16.04
TraesCS4A01G499900.1	Wheat	plastid	18.72	15.8
EER87676	Sorghum	plastid	18.52	13.95
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	17.28	13.75
CDY07137	Canola	extracellular, plasma membrane	8.85	13.69

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:A0A078EQW7	EnsemblPlants:CDY01928	ProteinID:CDY01928	ProteinID:CDY01928.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00113154001	InterPro:IPR003441
InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF109	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0004EE5FB3	SEG:seg	:

Description

BnaC02g27990D

Coordinates

chrLK031930:+:262917..267418

Molecular Weight (calculated)

55544.6 Da

IEP (calculated)

4.739

GRAVY (calculated)

-0.726

Length

486 amino acids

Sequence
(BLAST)

001: MENNLVGYRF SPTGEELINH YLKNKILGKS WLVDHAISQV NICRYEPWFL PSLSKLESKD LVWYFFSPKE YTSAKKNVTK RTTPSGYWKA TGVDRKIKDR
101: RGNGVEIGIK KTLVYYEGRV PNGVWTPWVL HEYHITSLPL NQRTYVICQV MYKGDDGDSL YGNNSNEPSS SMVSDSNPVK FINTSPEVEQ QGQEDGMSMY
201: DLLIPLNQQV DLSPYDVFNP NKSFTDNNYY PQTPYGDDYW NGLLDYNGGN FEDQGQEDGM SMYDLLIPLN QQVDLSPYDV FNPNKSFTDN NYYPQTPYGD
301: DYWNRLLDYN GGNFEDVFRN QELTIQENQS NHRPKRPLTG IIVDDSCSDS DAESISATSY RGTSSPGDSD GSVDEILSLR KGSSKDILTS INGNTRESRF
401: TRRTIPSKQE VKEGKSKAND DDASMDKKAL SPIMKTEKKG WFITEEAIQR NHKNAPYIYF MNMIIGLILL VAVIGNIIWF YEASEN

Best Arabidopsis Sequence Match ( AT4G01550.1 )
(BLAST)

001: MVKDLVGYRF YPTGEELINH YLKNKILGKT WLVDEAISEI NICSYDPIYL PSLSKIKSDD PVWYFFCPKE YTSAKKKVTK RTTSSGYWKA TGVDRKIKDK
101: RGNRGEIGIK KTLVYYEGRV PKGVWTPWVM HEYHITCLPQ DQRNYVICQV MYKGEDGDVP SGGNNSSEPS QSLVSDSNTV RATSPTALEF EKPGQENFFG
201: MSVDDLGTPK NEQEDFSLWD VLDPDMLFSD NNNPTVHPQA PHLTPNDDEF LGGLRHVNRE QVEYLFANED FISRPTLSMT ENRNDHRPKK ALSGIIVDYS
301: SDSNSDAESI SATSYQGTSS PGDDSVGSSN RQFLQTGGDE ILSSCNDLQT YGEPSISSST RQSQLTRSII RPKQEVKQDT SRAVDSDTSI DKESSMVKTE
401: KKSWFITEEA MERNRNNPRY IYLMRMIIGF ILLLALISNI ISVLQNLNPA MKFDRER

Arabidopsis Description

NAC69NAC domain-containing protein 69 [Source:UniProtKB/Swiss-Prot;Acc:Q9M126]
SUBAcon: [golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.