Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033306.1-P | Field mustard | nucleus | 55.62 | 54.17 |
| CDY11741 | Canola | nucleus | 18.18 | 48.92 |
| CDX89991 | Canola | nucleus | 34.22 | 47.58 |
| CDX90132 | Canola | nucleus | 15.24 | 46.34 |
| CDY15223 | Canola | nucleus | 26.2 | 46.23 |
| CDY15220 | Canola | nucleus | 23.26 | 43.07 |
| CDY32450 | Canola | nucleus | 24.33 | 40.62 |
| CDY55326 | Canola | nucleus | 25.67 | 39.67 |
| CDY32449 | Canola | nucleus | 23.53 | 39.29 |
| CDY55325 | Canola | nucleus | 25.94 | 38.19 |
| CDX89994 | Canola | nucleus | 24.87 | 37.05 |
| AT1G02250.1 | Thale cress | nucleus | 31.82 | 32.87 |
| CDX89995 | Canola | nucleus | 30.48 | 32.11 |
| CDX89990 | Canola | nucleus | 33.69 | 31.82 |
| AT3G04420.1 | Thale cress | nucleus | 27.81 | 30.41 |
| AT1G02230.1 | Thale cress | nucleus | 28.88 | 30.08 |
| CDY15218 | Canola | nucleus | 27.81 | 28.49 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 19.25 | 27.8 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 31.28 | 27.53 |
| CDY15225 | Canola | nucleus | 29.14 | 27.32 |
| CDX89993 | Canola | nucleus | 32.09 | 25.7 |
| CDY15214 | Canola | nucleus | 20.32 | 25.68 |
| CDY59815 | Canola | cytosol | 17.65 | 24.72 |
| CDY07138 | Canola | nucleus | 18.72 | 24.31 |
| AT1G02220.1 | Thale cress | nucleus | 25.4 | 24.11 |
| KRH06324 | Soybean | cytosol | 16.04 | 22.47 |
| CDX89996 | Canola | nucleus | 14.44 | 20.93 |
| CDY07135 | Canola | nucleus | 20.59 | 20.75 |
| KRH47750 | Soybean | cytosol | 16.31 | 19.81 |
| CDY15215 | Canola | nucleus | 22.46 | 19.76 |
| CDY15212 | Canola | nucleus | 21.93 | 19.29 |
| CDX97252 | Canola | cytosol | 20.86 | 18.27 |
| CDX89999 | Canola | nucleus | 22.73 | 17.89 |
| CDY07136 | Canola | cytosol | 19.79 | 17.37 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 22.19 | 17.08 |
| KRH47748 | Soybean | cytosol | 18.45 | 17.04 |
| Os06t0101800-01 | Rice | nucleus | 16.31 | 16.99 |
| CDY59814 | Canola | cytosol | 18.98 | 16.71 |
| KRH06327 | Soybean | cytosol | 17.65 | 16.5 |
| CDY15217 | Canola | nucleus | 14.97 | 16.05 |
| KRH06326 | Soybean | nucleus | 18.18 | 15.78 |
| CDY59812 | Canola | cytosol | 18.98 | 15.74 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 19.52 | 13.83 |
| KRH47747 | Soybean | nucleus | 18.18 | 13.68 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 17.91 | 12.64 |
| TraesCS7D01G000200.1 | Wheat | plastid | 18.72 | 12.48 |
| TraesCS4A01G499900.1 | Wheat | plastid | 18.98 | 12.33 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 17.65 | 10.8 |
| EER87676 | Sorghum | plastid | 17.65 | 10.23 |
| CDY07137 | Canola | extracellular, plasma membrane | 7.22 | 8.6 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FQS9 | UniProt:A0A078FQS9 | EnsemblPlants:CDY15224 | ProteinID:CDY15224 |
| ProteinID:CDY15224.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00085419001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF58 | SUPFAM:SSF101941 | UniParc:UPI0004EE81D3 | SEG:seg | : | : |
Description
BnaC05g01030DBnaC05g01030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQS9]
Coordinates
chrLK032052:-:557708..559436
Molecular Weight (calculated)
39328.7 Da
IEP (calculated)
5.447
GRAVY (calculated)
-0.634
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDPHPVGFR FRPTDEEIFN PYLKSKNMDG NTSHVDEVIS TVDIYSFDPS ELASQSSSTR KETDNVLYFF CPKENRYNRG ERQSRKTKSG SWKKTGVTTN
101: IMRKRGDCEK IGEKRVFVFQ YSKILGGTKL KSDWVMHEYV ATFVSPAQTP MVTYTLCKVM FKGDASDLPS SSAAPAGGGG GRGCDGGCDG GGGGCDGGGG
201: GGGCGGGGGS GCGRGGGGGG DGGGCGGGGG GDGGAGDGGC GCGGGGGCDG CGGGGGEFEH THSLIIPMNN PGGGMSAEAE RSSSELHNPR QFSGFLHLEE
301: ETQMEDAIRR AINSLSPHDL NCLLNNDYDD EEQGNTQEVD TKIRQENQAM FFYLKNMIPL KMRSIKSTFY NFQV
101: IMRKRGDCEK IGEKRVFVFQ YSKILGGTKL KSDWVMHEYV ATFVSPAQTP MVTYTLCKVM FKGDASDLPS SSAAPAGGGG GRGCDGGCDG GGGGCDGGGG
201: GGGCGGGGGS GCGRGGGGGG DGGGCGGGGG GDGGAGDGGC GCGGGGGCDG CGGGGGEFEH THSLIIPMNN PGGGMSAEAE RSSSELHNPR QFSGFLHLEE
301: ETQMEDAIRR AINSLSPHDL NCLLNNDYDD EEQGNTQEVD TKIRQENQAM FFYLKNMIPL KMRSIKSTFY NFQV
001: MMNPVGFRFR PNDEEIVDHY LRPKNLDSDT SHVDEVISTV DICSFEPWDL PSKSMIKSRD GVWYFFSVKE MKYNRGDQQR RRTNSGFWKK TGKTMTVMRK
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
Arabidopsis Description
NAC004NAC domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81913]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.