Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033308.1-P | Field mustard | nucleus | 75.19 | 75.76 |
| CDX89990 | Canola | nucleus | 75.19 | 75.76 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 54.64 | 51.29 |
| CDX89993 | Canola | nucleus | 55.89 | 47.75 |
| CDY15223 | Canola | nucleus | 22.31 | 41.98 |
| CDY15220 | Canola | nucleus | 20.8 | 41.09 |
| AT1G02230.1 | Thale cress | nucleus | 36.84 | 40.95 |
| CDY55326 | Canola | nucleus | 24.81 | 40.91 |
| AT1G02250.1 | Thale cress | nucleus | 36.84 | 40.61 |
| CDX89995 | Canola | nucleus | 36.09 | 40.56 |
| CDY15218 | Canola | nucleus | 36.59 | 40.0 |
| CDY32450 | Canola | nucleus | 21.55 | 38.39 |
| CDX89991 | Canola | nucleus | 25.56 | 37.92 |
| CDY32449 | Canola | nucleus | 21.05 | 37.5 |
| CDX89994 | Canola | nucleus | 23.56 | 37.45 |
| AT3G04420.1 | Thale cress | nucleus | 32.08 | 37.43 |
| CDY55325 | Canola | nucleus | 22.81 | 35.83 |
| AT1G02220.1 | Thale cress | nucleus | 34.34 | 34.77 |
| CDY11741 | Canola | nucleus | 11.03 | 31.65 |
| CDX90132 | Canola | nucleus | 9.02 | 29.27 |
| CDY15224 | Canola | cytosol | 27.32 | 29.14 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 17.04 | 26.25 |
| CDY15214 | Canola | nucleus | 18.55 | 25.0 |
| CDY59815 | Canola | cytosol | 15.54 | 23.22 |
| CDY07138 | Canola | nucleus | 16.04 | 22.22 |
| CDX97252 | Canola | cytosol | 22.81 | 21.31 |
| CDX89996 | Canola | nucleus | 13.03 | 20.16 |
| CDY07135 | Canola | nucleus | 18.3 | 19.68 |
| CDY59814 | Canola | cytosol | 20.55 | 19.29 |
| CDY15215 | Canola | nucleus | 19.3 | 18.12 |
| CDY15217 | Canola | nucleus | 15.79 | 18.05 |
| KRH06324 | Soybean | cytosol | 12.03 | 17.98 |
| CDY07136 | Canola | cytosol | 18.8 | 17.61 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 21.3 | 17.49 |
| CDY15212 | Canola | nucleus | 17.79 | 16.71 |
| CDY59812 | Canola | cytosol | 18.8 | 16.63 |
| KRH47748 | Soybean | cytosol | 16.29 | 16.05 |
| KRH06326 | Soybean | nucleus | 17.04 | 15.78 |
| KRH47750 | Soybean | cytosol | 12.03 | 15.58 |
| Os06t0101800-01 | Rice | nucleus | 13.78 | 15.32 |
| CDX89999 | Canola | nucleus | 18.05 | 15.16 |
| KRH06327 | Soybean | cytosol | 14.79 | 14.75 |
| TraesCS4A01G499900.1 | Wheat | plastid | 16.79 | 11.63 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 15.29 | 11.55 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 15.29 | 11.51 |
| CDY07137 | Canola | extracellular, plasma membrane | 8.27 | 10.51 |
| KRH47747 | Soybean | nucleus | 13.03 | 10.46 |
| TraesCS7D01G000200.1 | Wheat | plastid | 13.78 | 9.8 |
| EER87676 | Sorghum | plastid | 15.04 | 9.3 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 13.78 | 9.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FLA6 | UniProt:A0A078FLA6 | EnsemblPlants:CDY15225 | ProteinID:CDY15225 |
| ProteinID:CDY15225.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00085420001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF58 | SUPFAM:SSF101941 | UniParc:UPI0004EE4B46 | SEG:seg | : | : |
Description
BnaC05g01040DBnaC05g01040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLA6]
Coordinates
chrLK032052:-:562817..565342
Molecular Weight (calculated)
45489.5 Da
IEP (calculated)
5.979
GRAVY (calculated)
-0.586
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MYCLIESKLL YFNEQIIKYL FITNSDLTVQ FIYEFMSTVD IYEFDPWELP CKCSRINSTD EVWYFFGCKK DQHNRGERQS RRTKSGFWKK TGPTMDIMRK
101: RGNREKIGEK RVFVFQYSKI LGGPSKPKSD WVMHEYVATF SSPDSHNQTM MMMMKYTVCK VMFKGDERVL SSSSSSSSFA GQIQHHHLSL IPHVNSNNSG
201: GLSTETEVDP RQFTGFPHLE EETQFEDEML RVFNNLPTDD WNSLFSNDEE QGNAIFMQED RNDYRPKMSL TGVFIDHSDD DSDSDSKSST TTTTGSIKTS
301: STCVTFGFSN HLIDLPESPS SSTIESGSVT QEVSNALGAN SAISEKKMSP CDDDAQVSEI GGDQMGQEMV IKHKRAGFIY RMIQKFAKKI KLCSCVSRI
101: RGNREKIGEK RVFVFQYSKI LGGPSKPKSD WVMHEYVATF SSPDSHNQTM MMMMKYTVCK VMFKGDERVL SSSSSSSSFA GQIQHHHLSL IPHVNSNNSG
201: GLSTETEVDP RQFTGFPHLE EETQFEDEML RVFNNLPTDD WNSLFSNDEE QGNAIFMQED RNDYRPKMSL TGVFIDHSDD DSDSDSKSST TTTTGSIKTS
301: STCVTFGFSN HLIDLPESPS SSTIESGSVT QEVSNALGAN SAISEKKMSP CDDDAQVSEI GGDQMGQEMV IKHKRAGFIY RMIQKFAKKI KLCSCVSRI
001: MANPVGFRFR PTDGEIVDIY LRPKNLESNT SHVDEVISTV DICSFDPWDL PSHSRMKTRD QVWYFFGRKE NKYGKGDRQI RKTKSGFWKK TGVTMDIMRK
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT
Arabidopsis Description
NAC005NAC domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O81914]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.