Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0242900-01
Os01t0667100-01
Os02t0119400-01
Os03t0149200-01
Os03t0358200-00
Os03t0646400-01
Os03t0795600-01
Os04t0103300-01
Os04t0181100-01
Os04t0679900-01
Os05t0486200-01
Os05t0564800-01
Os06t0136500-01
Os07t0177200-01
Os07t0458500-00
Os07t0458700-01
Os07t0655400-01
Os08t0277900-01
Os10t0445500-01
Os11t0528500-01
Os11t0581900-01
Os12t0633200-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01010.1 Os12t0633200-01 AT1G10030.1 21798944
AT1G01010.1 Os06t0136500-01 AT1G12390.1 21798944
AT1G01010.1 Os02t0119400-01 AT1G16240.1 21798944
AT1G01010.1 Os08t0277900-01 AT1G16240.1 21798944
AT1G01010.1 Os01t0242900-01 AT1G17080.1 21798944
AT1G01010.1 Os01t0667100-01 AT1G17080.1 21798944
AT1G01010.1 Os05t0564800-01 AT1G17080.1 21798944
AT1G01010.1 Os05t0486200-01 AT1G77350.1 21798944
AT1G01010.1 Os04t0679900-01 AT2G20740.1 21798944
AT1G01010.1 Os03t0646400-01 AT2G32380.1 21798944
AT1G01010.1 Os07t0458500-00 AT2G32380.1 21798944
AT1G01010.1 Os07t0458700-01 AT2G32380.1 21798944
AT1G01010.1 Os03t0358200-00 AT3G07950.1 21798944
AT1G01010.1 Os04t0103300-01 AT3G07950.1 21798944
AT1G01010.1 Os07t0655400-01 AT3G07950.1 21798944
AT1G01010.1 Os03t0795600-01 AT4G14730.1 21798944
AT1G01010.1 Os07t0177200-01 AT4G14730.1 21798944
AT1G01010.1 Os11t0581900-01 AT4G14730.1 21798944
AT1G01010.1 Os03t0149200-01 AT5G43460.1 21798944
AT1G01010.1 Os04t0181100-01 AT5G43460.1 21798944
AT1G01010.1 Os10t0445500-01 AT5G43460.1 21798944
AT1G01010.1 Os11t0528500-01 AT5G51010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH06324 Soybean cytosol 24.51 32.96
CDY32449 Canola nucleus 18.66 29.91
CDY32450 Canola nucleus 18.66 29.91
AT1G02210.1 Thale cress cytosol, nucleus, plastid 7.24 29.89
Bra032615.1-P Field mustard nucleus 18.38 29.46
CDX90132 Canola nucleus 10.03 29.27
Bra010895.1-P Field mustard nucleus 10.03 29.27
CDY11741 Canola nucleus 10.86 28.06
CDY15223 Canola nucleus 16.43 27.83
CDY15220 Canola nucleus 15.6 27.72
CDY59815 Canola cytosol 20.06 26.97
TraesCS7A01G000300.1 Wheat nucleus 39.55 26.89
CDY15210 Canola cytosol, nucleus, plastid 19.22 26.64
CDY07138 Canola nucleus 20.89 26.04
CDY55326 Canola nucleus 17.55 26.03
KRH47750 Soybean cytosol 22.28 25.97
HORVU7Hr1G000910.1 Barley nucleus 38.16 25.85
TraesCS7D01G000200.1 Wheat plastid 40.39 25.85
Bra036328.1-P Field mustard nucleus 20.61 25.69
Bra033299.1-P Field mustard nucleus 17.83 25.5
CDY55325 Canola nucleus 17.83 25.2
AT3G04430.1 Thale cress nucleus 13.65 24.75
CDX89994 Canola nucleus 17.27 24.7
Zm00001d045617_P001 Maize nucleus, plasma membrane, vacuole 40.95 24.06
AT4G01520.1 Thale cress nucleus 20.06 23.84
TraesCS4A01G499900.1 Wheat plastid 38.16 23.78
EER87676 Sorghum plastid 41.23 22.95
AT1G02230.1 Thale cress nucleus 22.84 22.84
Bra027596.1-P Field mustard nucleus 15.32 22.73
CDX89996 Canola nucleus 16.16 22.48
CDY15214 Canola nucleus 18.38 22.3
AT1G02250.1 Thale cress nucleus 22.01 21.82
CDX89991 Canola nucleus 16.16 21.56
Bra033297.1-P Field mustard nucleus 13.37 21.33
Bra033302.1-P Field mustard nucleus 15.32 21.15
CDX89995 Canola nucleus 20.33 20.56
Bra036326.1-P Field mustard nucleus 21.17 20.54
AT3G04420.1 Thale cress nucleus 19.5 20.47
CDY07135 Canola nucleus 20.61 19.95
KRH47748 Soybean cytosol 21.73 19.26
KRH06326 Soybean nucleus 23.12 19.26
Bra033298.1-P Field mustard nucleus 20.06 19.25
KRH06327 Soybean cytosol 21.17 19.0
Bra033305.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 14.48 18.44
AT4G01550.1 Thale cress cytosol, golgi, nucleus 23.4 18.38
CDX97252 Canola cytosol 21.73 18.27
CDY15217 Canola nucleus 17.55 18.05
CDY07136 Canola cytosol 21.17 17.84
Bra008553.1-P Field mustard cytosol, nucleus, plasma membrane 22.01 17.83
CDY59814 Canola cytosol 20.89 17.65
Bra036327.1-P Field mustard cytosol 20.89 17.65
KRH47747 Soybean nucleus 24.23 17.5
AT1G02220.1 Thale cress nucleus 18.66 17.01
Bra033306.1-P Field mustard nucleus 18.11 16.93
CDY15218 Canola nucleus 16.99 16.71
Bra033308.1-P Field mustard nucleus 18.38 16.67
CDX89990 Canola nucleus 18.38 16.67
Bra033303.1-P Field mustard nucleus 17.55 16.41
AT1G01010.1 Thale cress nucleus 19.5 16.32
CDY15224 Canola cytosol 16.99 16.31
CDY59812 Canola cytosol 20.33 16.19
AT4G01540.1 Thale cress cytosol 21.17 16.07
CDY01928 Canola cytosol, nucleus, vacuole 21.73 16.05
CDY15215 Canola nucleus 18.38 15.53
CDY15221 Canola cytosol, nucleus, peroxisome 18.38 15.53
CDY15212 Canola nucleus 17.83 15.06
CDX89993 Canola nucleus 18.94 14.56
Bra033300.1-P Field mustard nucleus 18.11 14.16
CDY15225 Canola nucleus 15.32 13.78
CDX89999 Canola nucleus 17.55 13.26
Bra033296.1-P Field mustard nucleus 17.55 13.26
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150EMBL:AK064178ProteinID:BAF18445.1ProteinID:BAS95701.1GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021InterPro:IPR003441InterPro:IPR036093
InterPro:NAC-domInterPro:NAC_dom_sfEnsemblPlantsGene:Os06g0101800EnsemblPlants:Os06t0101800-01PFAM:PF02365PFscan:PS51005
PANTHER:PTHR31989PANTHER:PTHR31989:SF54UniProt:Q0DFC8SUPFAM:SSF101941UniParc:UPI0000E1262BSEG:seg
Description
NAC DOMAIN-CONTAINING PROTEIN 19Similar to NAC-domain protein 1-1. (Os06t0101800-01)
Coordinates
chr6:-:153418..156618
Molecular Weight (calculated)
40218.2 Da
IEP (calculated)
7.255
GRAVY (calculated)
-0.650
Length
359 amino acids
Sequence
(BLAST)
001: MKQGKVEMTP AVAAAAVLPV GFRFRPTDEE LVRHYLKGKI AGRSHPDLLL IPDVDLSTCE PWDLPAMSVI KSDDPEWFFF APRDRKYPGG HRSNRSTAAG
101: YWKATGKDRL IRSRPAGPLI GIKKTLVFHR GRAPRGLRTA WIMHEYRTTE PHFQSGKNGS FVLYRLFNKH EQDDTHTPAS NLDQQLSTSS QGNPQNGTPA
201: VQPALASIMK DHQTLPSSGF SQLTEIQDAS TSVHDKEQTV AHDDAFLDVL SQLPDLEPEQ RYNGFPNITS PIRPYSDHPF VGNLGEQDLS AHFGSTLSEQ
301: DLQSLLFSPN YTKMDKHPTG NVESNPTASS NNPNNNTLLM DSWRKNDSYQ MLLIQVRIF
Best Arabidopsis Sequence Match ( AT4G35580.3 )
(BLAST)
001: MGAVSMESLP LGFRFRPTDE ELVNHYLRLK INGRHSDVRV IPDIDVCKWE PWDLPALSVI KTDDPEWFFF CPRDRKYPNG HRSNRATDSG YWKATGKDRS
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEFVVVTGT GAEQKETRRE AMEGGCNGNG
501: GCDGWGRDGY MEDTGEFMTH ETQRERERES NVV
Arabidopsis Description
NTL9NAC transcription factor-like 9 [Source:TAIR;Acc:AT4G35580]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.